Gene Caci_5564 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5564 
Symbol 
ID8336924 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6415101 
End bp6415667 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content67% 
IMG OID644958668 
Productbifunctional deaminase-reductase domain protein 
Protein accessionYP_003116264 
Protein GI256394700 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0262] Dihydrofolate reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGAAGC TGATCGCGAC AGTGTTCAAC TATTCATTGG ACGGCCTGCT CGCCGACGAG 
GACACCGAGT TCTGGCGGTT CTGCTTCGAC CAGCCCGAGA ACAACCAGCC CGACGACCCG
GAGCACCTGG AGTTCCTGCG CGGCGCGGAC GCCCACGTCA TGGGCCGCGC CGCGTATGAG
GGCATCTCGG CCGCCATGAC GGTGCACGCG ACCGACCACC CGTTCGCCGG CATCCTGACC
GCCGGGCGCA AGGTCGTCTT CAGTCGGAGC CTGAAGACTG CGGATTGGGC CAACACGACC
ATCGCCTCGG GCGACACGCG CGATGAGATC GAGCAGCTCA AGCAGGGCGG CGACGGCTAC
ATCGTGGTCT GGGGCGGGGT CGGGCTCTTC CGGTCGCTCC TGGACCTCGA CGTGGTCGAC
GAACTCTGGC TCAGCGTGTT CCCCTACATC GCGGGGGAGG GGACGCGGAT CTTCGACGGC
GTGCCCTCGT CCTACGCGCT CGAGCTGATC TCGAGCACGG CTTCCCCCAG CGGGATCATG
GAGCTGCGAT ACCGGCGACG GCGCTGA
 
Protein sequence
MRKLIATVFN YSLDGLLADE DTEFWRFCFD QPENNQPDDP EHLEFLRGAD AHVMGRAAYE 
GISAAMTVHA TDHPFAGILT AGRKVVFSRS LKTADWANTT IASGDTRDEI EQLKQGGDGY
IVVWGGVGLF RSLLDLDVVD ELWLSVFPYI AGEGTRIFDG VPSSYALELI SSTASPSGIM
ELRYRRRR