Gene Caci_5556 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5556 
Symbol 
ID8336916 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6406937 
End bp6407329 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content64% 
IMG OID644958660 
ProductNUDIX hydrolase 
Protein accessionYP_003116256 
Protein GI256394692 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.239043 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGATCG TCCACGAGGT CGCAATCGTT GTTCTCACTG ACCCAGCCGG GCGGGTGTTG 
ATGCAGCATC GCGGTCACGA TGCGGACGTG GAACCGGACC GGTGGACGCC TCCGGGTGGA
CACCTGGAGC CTGGGGAGGA TGCGATGACC GCCGCCTGCC GCGAGCTGCT TGAGGAGACC
GGGCTGACGG CTGTTCTGCA GCCCGGTCGG GTGGTGGAGC GAGTCGATGC GGCCGGGGCT
GGAGTGCGCT TCCATGTGTT CACCGGCCGC ACCGACGCCC GCCAGGAAGA CGTGATCTTG
GGTGAGGGAC AGGCGATGCG GTTCCTCACC CTCGACGAGA TCGCCATAAA GGAACTGGTC
AGCAATGCTG ATCTGTTTTT GAGCCTGGTT TAG
 
Protein sequence
MEIVHEVAIV VLTDPAGRVL MQHRGHDADV EPDRWTPPGG HLEPGEDAMT AACRELLEET 
GLTAVLQPGR VVERVDAAGA GVRFHVFTGR TDARQEDVIL GEGQAMRFLT LDEIAIKELV
SNADLFLSLV