Gene Caci_5460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5460 
Symbol 
ID8336814 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6289159 
End bp6290691 
Gene Length1533 bp 
Protein Length510 aa 
Translation table11 
GC content72% 
IMG OID644958558 
ProductAldehyde Dehydrogenase 
Protein accessionYP_003116160 
Protein GI256394596 
COG category[C] Energy production and conversion 
COG ID[COG1012] NAD-dependent aldehyde dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.618986 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.10638 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGATC AGGGTTCAGC CGACGGCGCG GCTGTCGGCG TTCTGGAACC GGGCGCCCCC 
AGCTTCATCT CCTACGACCC CGCCGGCGGC GGCGAGGTCG CCACCTTCCC TGAGACGAGC
GCCGAGCAGG TGCGCGCGGT CGTGGGCGAG GCGCGCCAGG CGTTCGCCTG GTGGTCCGGC
CTCACCTGGG CCGAGCGGGA GCAGCGGTTG CGCAAGTGGG CCGGCGCCAT CACCCGCGGG
CTCGACGACC TGTGCGAGCT GATGCACCGG GAGAACGGCA AGCCGCGGGG GGACGCCTTC
CTGGAGGCGT TCCTGGCCAT CGAGCACATC GGCTGGGCCG CCGGGCACGC GCGCAAGGTG
CTGCACCCGC GGCGCGTCGG CACCGGCCTG CTGATGGCCA ACCACGCCGC GACGCTGGAG
TACCAGCCGC TGGGCGTGGT CGGTGTCATC GGGCCGTGGA ACTATCCGGT GTTCACCCCG
ATGGGGTCGA TCGCCTACGC GCTGGCGGCC GGCAACGCCG TGGTGTTCAA GCCCTCGGAG
TACACCACCG CGATCGGCAA GTGGATCGTC GACGCCTTCG ACCAGGCCAA TCCCGACGCG
CCGCACCAGG TGCTGCGGCT GATCACCGGG ACCGGCCCGA CCGGGGCGGC GCTGTGCGAG
TCGGGCGTGG ACAAGATCGC GTTCACCGGC AGCGCGCGGA CCGGACGCAA GGTGATGGCC
GCGTGCGCGC CCTCGCTCAC GCCGGTGCTC ATGGAGTGCG GCGGCAAGGA CGCGATGATC
GTGGCCGGCG ACGCGGACCT GGCCAAGGCC GCCGACGCCG CGCTGTGGGG CGCGATGTCC
AACGCCGGGC AGACCTGCGT GGGCATCGAG CGGGTCTACG TCGTGGACGC GGTGAAGGAC
AAGTTCGTCA CCGAGCTGAC CGCGCAGATC CAGAAGCTGG CGCTGGCGCC GGGCGAGGGT
CCGGACGCCG CCTACGGCCC GATGACCATG CCCTCGCAGA TCGACGTGGT CCGCCGGCAC
ATCGACGACG CCATCGCCAA GGGCGGCACG GTGGTGGTCG GCGGCAGCGG CGCGGTGCGG
GCGCCGTATG TGGAGCCGAC GGTGCTCCTG GACACGCCCG AGGACTCCAG CGCGGTGCGC
GAGGAGACCT TCGGCCCGAC GATCACGGTC AAGGGCGTGC GCGACGTCGA GGAAGCGATC
CAGCTCGCCA ACGCCACCGA CTACGGCCTC GGCGCGTCGG TCTTCGCCCG CCGGGGCGGC
ACGGCCATCG CCCGGCGCCT GCGCAGCGGT ATGACCTCGG TCAACGCCGT CATCGCCTTC
GCCGGGATCC CGGGGCTGCC CTTCGGCGGG GTCGGGGAGT CCGGCTTCGG CCGCATCCAC
GGCGCCGACG GGCTGCGCGA GTTCACCCGC CCGAAGGCGA TCACCCGGCG CCGGTACTCC
ACGCCCTTCG AGCCGGCGAC GTTCGCGCGC CACCCGAAGA CGTTCACGAT CATGAAGAAG
TACGCCGAGA CGCGGTACGG CCGCAAGAAG TAG
 
Protein sequence
MSDQGSADGA AVGVLEPGAP SFISYDPAGG GEVATFPETS AEQVRAVVGE ARQAFAWWSG 
LTWAEREQRL RKWAGAITRG LDDLCELMHR ENGKPRGDAF LEAFLAIEHI GWAAGHARKV
LHPRRVGTGL LMANHAATLE YQPLGVVGVI GPWNYPVFTP MGSIAYALAA GNAVVFKPSE
YTTAIGKWIV DAFDQANPDA PHQVLRLITG TGPTGAALCE SGVDKIAFTG SARTGRKVMA
ACAPSLTPVL MECGGKDAMI VAGDADLAKA ADAALWGAMS NAGQTCVGIE RVYVVDAVKD
KFVTELTAQI QKLALAPGEG PDAAYGPMTM PSQIDVVRRH IDDAIAKGGT VVVGGSGAVR
APYVEPTVLL DTPEDSSAVR EETFGPTITV KGVRDVEEAI QLANATDYGL GASVFARRGG
TAIARRLRSG MTSVNAVIAF AGIPGLPFGG VGESGFGRIH GADGLREFTR PKAITRRRYS
TPFEPATFAR HPKTFTIMKK YAETRYGRKK