| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5456 |
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| Symbol | |
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| ID | 8336810 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 6286608 |
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| End bp | 6287261 |
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| Gene Length | 654 bp |
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| Protein Length | 217 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644958554 |
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| Product | HAD-superfamily hydrolase, subfamily IA, variant 1 |
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| Protein accession | YP_003116156 |
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| Protein GI | 256394592 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.474023 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.179199 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCTCAC TGGCGCTATT CGACCTGGAC GACACCCTCA TCGCCCTGTC TCCGGCCTTC
CGGCGCTTCG CCCGCGACTT CGCGCGGCAA TACGCGCTGC CGGCGGAAGC CGAGGATTGG
CTGTTCAGGG CATGGGATCC CTACCAGCGG CGTGACGAGT TTTTCGCCCG AGTGCGGGAA
CGCTATGGGC TCGCCGAGTC TGTGGAGGAC TTGTGGCGGC TCTACCGCAC GCGCATGCCG
GAGTTCGTGG AGCTGCGCGA CGAAGTGCGC GACGGCCTGG TGGCGATGCG GCGCGCCGGA
TGGCGGCTGG GGATCGTGAC CAACGGCGAA GCGGACAACC AACTGGGCAA GGTCGAGCGC
ACCGGGCTGG ACCGGCTCGT GGACTCGGTG GCGGTGTCCG GTGCGCTGGG GATTCGCAAG
CCCGATGCGG AGATCTTCCG GATCGCGGCT GAGGGTGCGG GGTGCGCGTT GGCCGACGGA
GGCTGGATGG TCGGCGACAA TGCGCACGCT GACATCGAAG GCGGCGCGGC GGTCGGGCTG
CGGACCGTCT GGGTCGACGG CATCGAAGGC AGGTGGGACG TCGCCCCGGC GGCGACCGTC
GTGGTCAAGG ATGTCGTGGA GGCGTTCCCG ATCCTGCTGA CCCGACCGTG CTGA
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| Protein sequence | MGSLALFDLD DTLIALSPAF RRFARDFARQ YALPAEAEDW LFRAWDPYQR RDEFFARVRE
RYGLAESVED LWRLYRTRMP EFVELRDEVR DGLVAMRRAG WRLGIVTNGE ADNQLGKVER
TGLDRLVDSV AVSGALGIRK PDAEIFRIAA EGAGCALADG GWMVGDNAHA DIEGGAAVGL
RTVWVDGIEG RWDVAPAATV VVKDVVEAFP ILLTRPC
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