| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5454 |
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| Symbol | |
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| ID | 8336808 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 6281868 |
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| End bp | 6285437 |
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| Gene Length | 3570 bp |
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| Protein Length | 1189 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644958552 |
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| Product | alpha-1,2-mannosidase |
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| Protein accession | YP_003116154 |
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| Protein GI | 256394590 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3537] Putative alpha-1,2-mannosidase |
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| TIGRFAM ID | [TIGR01180] alpha-1,2-mannosidase, putative
[TIGR02276] 40-residue YVTN family beta-propeller repeat |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.8868 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.279794 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGGCT TCGGGAAACT TCGTACCCAG AGACGTACCT ATAGACGCAG CCGCGGACGC
AGCCGTACGG TCGGCGCCGC GTTGAGCGTC GCCGCGCTGG CGATGGCGTT CCTTCCGCAG
GACTCGGCCA CGGCTGCCGC GGCGGGTCCG GTGACCGATC CGGCGGCGCT GGTCAATCCC
CTGATCGGGA CGGGGAGCGG CGGGGACGTC GTCGGCCAGG TCGACACGTT CCCCGGCGCT
GTCGTGCCGT TCGGCATGGT GCAGTGGAGT CCGGACACCT CGTCGCGGCC GCCGGGTGGC
GGTTACAACT ATGCCGACAG CTCTATCACC GGGCTGAGCC TTACGCATGT GTCCGGTCCC
GGATGTGCCA TCGCCGGCGA CTTCCCGGTG CTGCCGCTTT CCGGCGCCGT CCCGGCTGAC
CCCGCCTCCG CGCAGCAGCC CTTCAGCCAT GCCTCTGAGT CGGCGACTCC CGGGGCGTAC
TCCGTGACGC TCGCTCCCGG AACCCCTAGC GCGGTGGGTG TGCGGCTGAG CGCCACCACG
CGCACCGGGC TGGCAGAGTT CTCCTTTCCC GCCACCGATC AGGCACATGT GCTGGTGAAG
TCCGCCGGGT CGGCGGCCGG TAGCTCGGCG GCGACGTTCG CGGTCAGCGG CGACCGGGAG
ATATCCGGAT CGGTCGCCAG CGGACACTTC TGCGGGCAGC CGAACTCCTA CACCGTGTAC
TTCGCCGCGC GGTTCGACCG ACCCTTCACC TCCTCGGCGT CGTGGGCTGG CGGGACCGGC
GGCACCCTCA CCTTCGACAC CCGCCACGCC TCGACAGTGC GCATGCAGGT CGGCATCTCC
TACACCTCGG CGGCCGGCGC GCGCCGCAAC CTCGCGGCCG AGGCCACCTC GTGGAGCGTG
AGCGATGTGG CGCGGGCGGC GCACAACGCC TGGAACCAGC AGCTCCGCAA GATCGAGATA
TCCGGCGGCA CCGCCGCCGA GCAGGCCAGC TTCTACACCG CGCTCTACCA CACGCAGCTG
GACCCGAACG TGATCGACGA CGCCGACGGC TCCTACCCCG GCTTCGACGG CAAGACCCAT
ACCGCCGCCC GCGACCACCA TCAGTACTCG GACTTCTCCG GCTGGGACGT CTACCGCTCC
GAGACGCAGC TGATCGCGAT GCTGGACCCG CAGCGCGGCT CGGATATGGC CCGCTCCCTG
CTCGCCGACG CCGACCAGGG CGGCTGGCTG CCCAAGTGGC CGTCGGTGAA CGGCTACACC
GGCGTGATGA ACGGCGACGC CGCCGATCCC ATGCTCGCCG ACCTCTACGC CTTCGGCGCC
CGCGACTTCG ACGTCCACCA GGCTGTCGCC GCGATGGTCC ACGGCGCGCA GGGCACCGGC
ACACCCGGCC AGGGCTGGTA TGTCGAGCGG CCGCACGGCC AGGACTACAT CGCAGACGGC
TATGTGCCCA ACGTCGGCTC CGACTCGATC AGCCCGGTCC CGAACGGCGC GTCGGAGACC
GAGGAGTACG CGGTCGCCGA CTTCGCCATC TCCCGGCTGG CGCAGGCCGG CGGCGACGCG
GCGGACGCCG GGGTGTTCCT GAAGCGCTCG CAGAACTGGG CCTCGGTCTT CAACACCGCC
ACCGGCTACA TCCAGCCTCG TGACGCCGGC GGAGCCTTCC CCTCCGGGGA CCCGGTCACC
GCCGGCCAGT CCGGCTTCGG GCAGAGCGGC TTCCAGGAGG GCAACACCTC GCAGTACACG
TGGATGGTCC CGCAGAACCT GCGCGCGCTG TTCGACGGCA TGGGCGGCGA CGCCGCCGTG
CGCCAGCGGC TGGACACCTA CTTCACCCAG CTCAACGTCG GTCCCAACCA GCCCTACCAC
TGGCAGGGCA ACGAGCCGGC GGAAGGCACG CCGTGGGCCT ACGACTCCGC CGGCGCGCCG
TGGGAGACGC AGCGCGTCGT GCGGCAGATC GTCTCGACGC TGTACGCGCC GACCCCCGGC
GGCGAGCCGG GCAACGACGA CCTCGGCGCG ATGAGCTCCT GGTACGTCTG GGCGACGCTG
GGCCTGTACC CGCAGACCCC CGGCGTGCCG ATGCTCGCGC TCGGCGCGCC GCTGTTCACC
TCGGAGGTCA TCCACGCCGG CGCCAACACC GTGACCGTCA AGGCCCCGCA GGCCGGCGAC
GCCGCTCCCT ACATCCAGGC GCTGAAGGTG GACGGCCGCA CGTCGCAGCA TGCGTATCTG
ATGCTGGACG GCCGTCCGCA CCACCTCGAC TACTCGCTGG GCGCCGCGCC GAACCAGGCG
TGGGGCTCGG CGCCGCAGGA CGCGCCGCCG TCGTTCTCGG CCGGGCCCGT CAGCTTCCCG
CCCTCCACCC GCGCCGCGGT GACGGTCACT CCGCAGCAGG TCCGCGTCGC GCCGGGGGAG
ACGACCCAGG TCGCGGTCAA GGTCGACAAC ACCCTCGGCA GCACGCCGGC GACGGTCACC
TGGACCGCCC AAGGCCCTGC CGGACTGACC GCGACGCCGT CGCAGGCCAC TGTCACGATC
CCGGCGGGCG GTGCGGTCTC CACCGCCGTC GCCCTGGCTC CCGCCGCGGC GATGGCCTCG
GGCTACTACC AGGTCGCGGT GCAGGCGAAG GCGTCGAACG GCGCGGCGAT CCCGACCACT
GACATCCTCG CCACCGTCGC CGCGCCGGGC GTGTTCATCC CGACCGCATA CGTCACCAAC
TACAGCGACG GAACGCTGAC TCCCGTCGAC ATCCGCACCG GCAACGCCGG ACCGCCGATC
CCGGTCGGCA GCGGACCCGA CGGCGAGGCG ATCACGCCGG ACGGCAAGCG GCTGTTCGTG
GCGAACAACA ACACGAACAA CGTGACCGTC ATCGACACCA CCGACAACCA CGTCATCGGC
ACGGTGACCG TCGGCAATGT CGCTGCCGAC GTGGCCGCGA CCCCCGACGG CAAGACGGTC
TGGGTCAGCG ACTTCAGCGA CGGCACCGTC CAGCCGATCG ACGTGGCGAC GCTGACCGCG
GGCACGCCGG TGAAGGTCGG CAGCCAAGCC GAGCGCGTGG CGGTCAACCC GGCCGGGACC
CAGCTGTGGG TCGCGGACCA GGGGGACGGC ACGGTCAGCG TCGTGGATCT CGCCTCCCGC
ACAGTGGTGC ACACCGTGGC CGTCGGCGCG GCGCCCTTCG GCATCGCCTT CGCGCATGAC
GGGTCCAAGG CTTATGTGAC CAACGGCGGC GGCAACAGCG TGTCGGTCAT CGACACCGGC
GCCGCCGCGG TCTCCGCCAC GATCCCGGTC GGCGCCGGAC CGCAGGGCAT CCGGGTCTCC
CCGGACGGCT CGGTGGTGTA CGTGGCCGAC TCCGGCGCCG GCGGCGTCAC GCCGATCGCC
ACCGCGACCG GCGTGGCCGG CCCGCTCATC CCGACAGGGT CCGGCGCGTA CGCGGTCGGG
TTCACTCCCG ACGGCAGCGT GGCGTGGGTC GTGGACACCA ACACCAACGA CGTGCGGCCG
GTCACCGTCG CCACCGGTGC CGTCGGGGCG GCGGTGAAGG TGGGGAACGT GCCGGACGGG
ATCGTGGTGA CGCCCGCGAC CGCGCCGTAG
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| Protein sequence | MRGFGKLRTQ RRTYRRSRGR SRTVGAALSV AALAMAFLPQ DSATAAAAGP VTDPAALVNP
LIGTGSGGDV VGQVDTFPGA VVPFGMVQWS PDTSSRPPGG GYNYADSSIT GLSLTHVSGP
GCAIAGDFPV LPLSGAVPAD PASAQQPFSH ASESATPGAY SVTLAPGTPS AVGVRLSATT
RTGLAEFSFP ATDQAHVLVK SAGSAAGSSA ATFAVSGDRE ISGSVASGHF CGQPNSYTVY
FAARFDRPFT SSASWAGGTG GTLTFDTRHA STVRMQVGIS YTSAAGARRN LAAEATSWSV
SDVARAAHNA WNQQLRKIEI SGGTAAEQAS FYTALYHTQL DPNVIDDADG SYPGFDGKTH
TAARDHHQYS DFSGWDVYRS ETQLIAMLDP QRGSDMARSL LADADQGGWL PKWPSVNGYT
GVMNGDAADP MLADLYAFGA RDFDVHQAVA AMVHGAQGTG TPGQGWYVER PHGQDYIADG
YVPNVGSDSI SPVPNGASET EEYAVADFAI SRLAQAGGDA ADAGVFLKRS QNWASVFNTA
TGYIQPRDAG GAFPSGDPVT AGQSGFGQSG FQEGNTSQYT WMVPQNLRAL FDGMGGDAAV
RQRLDTYFTQ LNVGPNQPYH WQGNEPAEGT PWAYDSAGAP WETQRVVRQI VSTLYAPTPG
GEPGNDDLGA MSSWYVWATL GLYPQTPGVP MLALGAPLFT SEVIHAGANT VTVKAPQAGD
AAPYIQALKV DGRTSQHAYL MLDGRPHHLD YSLGAAPNQA WGSAPQDAPP SFSAGPVSFP
PSTRAAVTVT PQQVRVAPGE TTQVAVKVDN TLGSTPATVT WTAQGPAGLT ATPSQATVTI
PAGGAVSTAV ALAPAAAMAS GYYQVAVQAK ASNGAAIPTT DILATVAAPG VFIPTAYVTN
YSDGTLTPVD IRTGNAGPPI PVGSGPDGEA ITPDGKRLFV ANNNTNNVTV IDTTDNHVIG
TVTVGNVAAD VAATPDGKTV WVSDFSDGTV QPIDVATLTA GTPVKVGSQA ERVAVNPAGT
QLWVADQGDG TVSVVDLASR TVVHTVAVGA APFGIAFAHD GSKAYVTNGG GNSVSVIDTG
AAAVSATIPV GAGPQGIRVS PDGSVVYVAD SGAGGVTPIA TATGVAGPLI PTGSGAYAVG
FTPDGSVAWV VDTNTNDVRP VTVATGAVGA AVKVGNVPDG IVVTPATAP
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