| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5421 |
|---|
| Symbol | |
|---|
| ID | 8336775 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 6248105 |
|---|
| End bp | 6249406 |
|---|
| Gene Length | 1302 bp |
|---|
| Protein Length | 433 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644958519 |
|---|
| Product | major facilitator superfamily MFS_1 |
|---|
| Protein accession | YP_003116121 |
|---|
| Protein GI | 256394557 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.266328 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCTGCGGC ACCTGACCGG GACAGCCGGC GCCGTGCCGG GCGCCGCCGT GTCGGGAAGC
GCCGAGTCCG GCGGCTCCCG ACACGGCGCG TTGGCGCAGT ACCGGTGGCG TTTGGTCGCA
GGCTTGGCGG TCAGCCAGAC CGTCGGTTAC GGCGTGCTGT TCTACGTCTT CTCCGTCTTC
CTCATCCCGA CCGCGCACGA CCTGCACACC AGCACGCCGG TGGTGACCGG GGCACTGACA
GCGTCACTGC TGGCCGCAGC CGCAGCCGCC GTCCCGGTCG GCCGCCACCT GGACCGACAC
GGCGGTCGAC TGCTGATGAC CGGCGGCTCG ATCGCCGCCA GTGTCCTGGT GGCGGTCTGG
TCCCAGGTCA CGTCGGTGTG GCAGTTGTAC GCCGTATGGA TCGGCATCGG GGTCGCCTCG
GCGGCGGTGT TGTACGAGGC GGCGTTCGCG GTGCTCGTCC CCTGGTTCGG CGCCGACAGC
CGCGCCAAAG CCCTGCTGGC GGTGACCATC GTGGCCGGCT TCGCCTCCAG CGTCTTCCTG
CCGAGCGCGG GATACCTGCT GGCCGATCTG GGTTGGCGCG ACGCGGTCTT GGTCCTGGCG
GTCGCGCACG CCGCACTCAC CGTTCCGTTT CACCTCTATA TACGTCGGCC TTCGCAGTCC
TCGACCAAGA CCGCTCCAGA TGGCCGGCGC CGACAGATCG TCTCCGTCGC GCTGCACGAC
CCGGTGTTCT GGACGCTCGG CTGTTCTCTG CTGGCCCAGG GCGCCGCTGT CTTCGTCATG
GGTGTCCTGC TGGTCGCCGC GCTCCGGGAT TTCGGACATT CGGCCACGTT CGCCGCCACC
ACCGCTGGGA TGCTCGGCGT GCTCTCGGTC AGCGGTCGCC TGGCGTTCAC CGCAGCAGGC
AGACGCGCAT CGGCGACCGA CGTCGCCGCT GCGGTGTTCG TGGTCCAGGG CATCGGTGTC
GGGCTACTCC CCCTGATCGG CAGAACCAGC CTCGGCGCGA TCGCCTGCGT CCTGGTCTTC
GGGCTCGGCT TCGGCGTGTC GACCCTGATC CGACCCGCCG TGCTCACCGC CCGCTACGGC
ACCGAGGCCT TCGCCACGCT GTCCGGGCTG CTCACCTTGC CGCTGACCCT GGTCAAAGCC
CTGGCTCCGC TCGTGTCGGC AGCGTGGGCG AGCGCTGCGC ACAGCTACGC CCCGCCGCTG
ACCGCATCAG CTGGGTGTTG CCTGATCGGG GCGGCGGCGA TGGCCGTGAT CCGCCAGTTG
GAGCGTCGAC GGAGGCCAGC GTTCGAGCCG CTTGCCTCGT AG
|
|---|
| Protein sequence | MLRHLTGTAG AVPGAAVSGS AESGGSRHGA LAQYRWRLVA GLAVSQTVGY GVLFYVFSVF
LIPTAHDLHT STPVVTGALT ASLLAAAAAA VPVGRHLDRH GGRLLMTGGS IAASVLVAVW
SQVTSVWQLY AVWIGIGVAS AAVLYEAAFA VLVPWFGADS RAKALLAVTI VAGFASSVFL
PSAGYLLADL GWRDAVLVLA VAHAALTVPF HLYIRRPSQS STKTAPDGRR RQIVSVALHD
PVFWTLGCSL LAQGAAVFVM GVLLVAALRD FGHSATFAAT TAGMLGVLSV SGRLAFTAAG
RRASATDVAA AVFVVQGIGV GLLPLIGRTS LGAIACVLVF GLGFGVSTLI RPAVLTARYG
TEAFATLSGL LTLPLTLVKA LAPLVSAAWA SAAHSYAPPL TASAGCCLIG AAAMAVIRQL
ERRRRPAFEP LAS
|
|---|
| |