Gene Caci_5402 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5402 
Symbol 
ID8336756 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6227138 
End bp6227704 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content75% 
IMG OID644958500 
Producthypothetical protein 
Protein accessionYP_003116102 
Protein GI256394538 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.17343 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCACGGG AACTCTTCGT CTACGACCCC CCGGAACGGT TCGTCGCCGG CACCGTCGGA 
CTCCCCGGGC ACCGCACCTT CTACCTGCAG GCGGCCTCCG GCGGCCGGAT CACCTCGGTG
GCGCTGGAGA AGGAGCAGGT CGAGGCGCTG GCCGAACGGC TGGACGACCT GCTGGACGAG
GTGGTGCGCC GCTCCGGCGG CGCCGCCCCG GTCCCGGCGA TCGCGCCGCT GGAGCTCTCC
GACGACAAGC CGCTGGAGCA GCCGGTCTTC GAGGAGTTCC GGGTCGCGGC CCTGGCCCTG
GCCTGGGACG GCGAGACCCA GCGGGTGGTC ATCGAGGCGA TGGCGCCGAT GGAGGGCGAG
GGCGAGCCGC CGCTGGGCGA CATGGAGGCC GACGGCCCGC CGACCATGGT GGTCCGGCTC
ACCGGCGCGC AGGCGCGGGC GTTCACCTCC CGGGCCAAGG CGGTCGTGTC GGCCGGGCGC
CCGCCGTGCC CGTTCTGCTC GCTGCCCCTG GACCCCGAGG GCCACGTCTG CCCGCGCTCC
AACGGCTACC GGCGGCGCGC CGCTTGA
 
Protein sequence
MSRELFVYDP PERFVAGTVG LPGHRTFYLQ AASGGRITSV ALEKEQVEAL AERLDDLLDE 
VVRRSGGAAP VPAIAPLELS DDKPLEQPVF EEFRVAALAL AWDGETQRVV IEAMAPMEGE
GEPPLGDMEA DGPPTMVVRL TGAQARAFTS RAKAVVSAGR PPCPFCSLPL DPEGHVCPRS
NGYRRRAA