Gene Caci_5398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5398 
Symbol 
ID8336752 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6222586 
End bp6223791 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content70% 
IMG OID644958496 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_003116098 
Protein GI256394534 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.154835 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.293524 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCACCG TTGCGCTCCC GCTGACCGCG CTGGCGGCGG CGCATGCGAC GAGTTTCGAG 
GTCGGGGTGG TCACTGCTGC CGGGTATGCG GCTTGGGCTG TGGTGGGGTT GCCGGCGGGG
GTGGTGGTGG GGCGGTTGCC GTTGCGGGGG ACGCAGATCG CTATGGATTT GGTGCGGGCT
GGGGCTTTGG TGTCTGTGCC GGTGGCTTGG TGGTTCGGGT CGGTGACGGT GGCTCAGTTG
GTGGTGGTCG CTTTGGTGGT GGGGGTGGCG TCGGTGGTGT TCGATGTCGG GAATGCCACG
ATGCTGCCGT TCTTGGTCGG CAAGGAGGAG CTGACTGCTC GCAACAGCCT TACGTCGGGG
GCTGAGGCGG TGACCACGTT GGCGGGGCCG TCGGTGGGTG GGGCGTTGGT GCAGGCGGTC
GGCGGGGCGG TGGCGATCGT GGTGGATGTT GTCAGCTACC TGGTGTCGGC GTTCTTGGTG
CGGAATGTGC CGCGGCCGCC CCGTTCGTCA CAGTCGCCGC AGGTCGGCGC GGGTTCGGCG
AAGGGCAGTA TTCGGGCGTC GATTCGGGAG GGGTGGCACT TCCTCATCCG CGAGCCGGTG
CAGCGGGCGA ATCTGTGGAT CGCGACGTCG ATGAACTTCG TCTGTGGCGC GTTGTTGGCG
CTCACGCCGC TGTTCCTGGT GCGGACGCTG GGATTGAGCG CGGCGTGGGT GGGCGCGACG
ATGGCGACCG AGGGGGTGGG GAGCTTGCTG GGGGCGTCGC TCACGCCGCG GCTGACCCGG
CGTATCGGCA CTGGGCGGGC GCTGCTCGCC GTGTCGCTGA TGCTCCCGCT CAGTTTCGCG
CCGATGCCGT TGGCGGGGCG CGGGTGGGCT GCGGGGGTGT TCGCGCTGGG CAATGCGGCG
TTCGCCGGGA TGGTCGTCGT CGCGAGCATC GTGGCGCGCA CCTATCGCCA GATCGCGACG
CCGACCGAGT TGCTGCCGCG GGTGATGGCG ACGGTGCGCG TCGTCTCCTG GGGGGTGATC
CCGATCGGCG CGCTGGCCGC CGGGAGTGTC GCGTCCTGGT ACGGCCCGCG CGCCGCGCTG
TGGTGCACCG CCGTGGCCAC GCTCGCCGTG CCGACGCTGG TGCTGACCAG TCCGATCCGC
ACGCGGCGGG AGATGTCCGA GAGCCCGGAA TCCCTTACAG CGCCACGCCC AGCAGCGCGT
CCGTGA
 
Protein sequence
MTTVALPLTA LAAAHATSFE VGVVTAAGYA AWAVVGLPAG VVVGRLPLRG TQIAMDLVRA 
GALVSVPVAW WFGSVTVAQL VVVALVVGVA SVVFDVGNAT MLPFLVGKEE LTARNSLTSG
AEAVTTLAGP SVGGALVQAV GGAVAIVVDV VSYLVSAFLV RNVPRPPRSS QSPQVGAGSA
KGSIRASIRE GWHFLIREPV QRANLWIATS MNFVCGALLA LTPLFLVRTL GLSAAWVGAT
MATEGVGSLL GASLTPRLTR RIGTGRALLA VSLMLPLSFA PMPLAGRGWA AGVFALGNAA
FAGMVVVASI VARTYRQIAT PTELLPRVMA TVRVVSWGVI PIGALAAGSV ASWYGPRAAL
WCTAVATLAV PTLVLTSPIR TRREMSESPE SLTAPRPAAR P