| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5389 |
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| Symbol | |
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| ID | 8336743 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 6213122 |
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| End bp | 6214129 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644958487 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_003116089 |
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| Protein GI | 256394525 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.112757 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCACAGC GCTGGTCGAC GATGGACGTG CCCAAAACCG CGCAGTTCGC GCGCTGGCGG
GAGCTGATCT GCGAGGCGTT CCTGGCGCTG ACGCCGGAAT CGGACCTGCG CGACGGGTTC
GCCGGGACGG TGGCCCAGCG GCAGCTGGCC GAGCTGAGCA TCGCGCGCAT CACCTCGCAG
CGGCAGCACG TGCGGCGCAC GACGCGGGAC ATCGACCGCT CGGCGTATCA GGGTTATTAC
GTGAACCTCC AGATCCGCGG CAGCAGTCTG ATGACCCAGG ACGGCCGCTC CACCGTGCTG
CACCCGGGCG ACCTCGCCGT CGTGGACACC ACCCGGCCCT TCGCCTTCGA CTTCCAGGAC
GACTTCCAGC AGCTCTCCCT CTACGCGCCG AAAGCCTTGC TGCTGCCCGG ATCCGGCACA
CCGGTCACCA CCGCGACCCG CGTCGCCACC GCCGCCGGTC CCGGCGCCGC CGTCCGCCAC
GCACTGCTCA GCCTCACCTC CGGCGACCTG TCCGAGGACA CCGCCGCCCG CCTCGCCGCC
CACGCCTGCG GCATCCTGTC CATCGCCCTG GACCAGCAGA CCGAACCCGA CCCGCGCTCC
ACTCCCCTGC GCCAGGACCG GCTGCACGCC GCCGCCCTCG CCGACATCGA CGAGCACCTC
ACCGACGCCG ACCTGTCCGC TGCCGCCGTA GCCGCCCGCC TGGGCGTCTC AGTCCGCCTG
CTCTACTCGG TCTTCGCCGG CCGCCGCCAC AGCTTCGCCT CCGAAGTCCG CCGCCGCCGC
CTCGACCACA CCTGGCGCGA CCTCCGGGAC CCGGCGCGCA CCCACCTGTG CGTCATCGAC
ATCGCGGTGG CGGCCGGGTT CGCCGACGTG ACCAGCTTCC ATCGGGCCTT CCGACGGGAG
TACGGACGGA CGCCGGCGCA GGTGCGGCGC GCTGCTTTGG GCGGGGTTGC CGATGACGGG
GATGGCGAGG GGGCGCTGCG GTCCCCCGCG TTGACAAACA TGGCCTGA
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| Protein sequence | MPQRWSTMDV PKTAQFARWR ELICEAFLAL TPESDLRDGF AGTVAQRQLA ELSIARITSQ
RQHVRRTTRD IDRSAYQGYY VNLQIRGSSL MTQDGRSTVL HPGDLAVVDT TRPFAFDFQD
DFQQLSLYAP KALLLPGSGT PVTTATRVAT AAGPGAAVRH ALLSLTSGDL SEDTAARLAA
HACGILSIAL DQQTEPDPRS TPLRQDRLHA AALADIDEHL TDADLSAAAV AARLGVSVRL
LYSVFAGRRH SFASEVRRRR LDHTWRDLRD PARTHLCVID IAVAAGFADV TSFHRAFRRE
YGRTPAQVRR AALGGVADDG DGEGALRSPA LTNMA
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