| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5387 |
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| Symbol | |
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| ID | 8336741 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 6210960 |
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| End bp | 6212135 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644958485 |
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| Product | glycosyl hydrolase family 88 |
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| Protein accession | YP_003116087 |
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| Protein GI | 256394523 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4225] Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0230208 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAAGAT CCACCCACCG AAGCCTGCGC CACGCCCTGC TCATGCTGCT CGCGGCCGCC
TTGGCCGCGG TCGGCGCAGT CGGCGCGGTC CCGGCCAAAG CCGCGACGAC CACCGACTGG
TCGGCCGCGG TGGTCAAGTC GACGATGCAG CGCTTCACGC CCAGCAGCAT CGGCGGCTGG
TCCTACCCCG TCGGCCTCTA CCTCTACGGC CAGTACCAGG TCTACCAGCG CACCCACGAT
CCGTCGTATC TGGCATATCT GAAGTCCTGG GTCGACCGGT TCGTCTCCTC CGACGGCACC
ATCGACCAGA GCTTCGACAG CCTGGACAGC ATGCTTGCCG GACGGCTGCT GATCATCCTG
CACCACGAGA CCGGCCAGGC TAAGTACGCC ACCGCGGCGG CCAAGATCTA CAACCGGCTC
GCCACCTACC CGCGCACGGC CGACGGCGGG TTCTGGCACG CCGACACCTC CTCGCGCGCC
CACCAGCTGT GGGATGACGG CCTGTACATG GTCGTGCCCT TTCTGGACGA GTACGGCAAA
GAGTTCGGCA ACTCTCAGGC CACTGACGCC GAGGCGGTCA AGCAGCTCAC CGTCTACGCG
AACCACCTGC AGCAGTCCGA CGGTCTACTC CAGCATGCCT ACGACGAGTC GAAGAAGGCC
AGCTGGGCCG ACAAGACCAC CGGCCTGTCG GTGGAGCAGT GGTGCCGCGC CAACGGCTGG
TACGGCATGG CGCTGGTGAC CACGCTCGAC GACATCCCGG CGACCCAGCC GGGCCGGGCC
ACGCTGCTGA CCGATCTGAA CAAGTTCGCC GCCGGTCTGC AGAAGTACCA GGACCCTGCG
ACAGGCCGCT GGTTCCAGGT GATCGACAAG CCGACGTCCG CCGGCAACTG GACCGAGACC
TCGTGCTCCA GCATGAACGC CTACACGCTC TCTCGCGCGG CCCAGCAGGG CTACATCGAT
TCGCACTACT CGGCCGTCGC GGCGAAGGCC TATCAGGGCG TGCTCGCGCG GATCTCGCTG
AGCAAGGGAC TGACGAATCT GACGAACATC TCGGTCGGGA CCAACGTCGG CGACTACTCG
TACTACATCG GACGCACGCA GGCCACGAAC GACTTCCACG GCCTGGGCTC CTTCCTGATC
ATGAACGAGC AGTTCGTAAG AGCAGGAGGT TCCTGA
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| Protein sequence | MRRSTHRSLR HALLMLLAAA LAAVGAVGAV PAKAATTTDW SAAVVKSTMQ RFTPSSIGGW
SYPVGLYLYG QYQVYQRTHD PSYLAYLKSW VDRFVSSDGT IDQSFDSLDS MLAGRLLIIL
HHETGQAKYA TAAAKIYNRL ATYPRTADGG FWHADTSSRA HQLWDDGLYM VVPFLDEYGK
EFGNSQATDA EAVKQLTVYA NHLQQSDGLL QHAYDESKKA SWADKTTGLS VEQWCRANGW
YGMALVTTLD DIPATQPGRA TLLTDLNKFA AGLQKYQDPA TGRWFQVIDK PTSAGNWTET
SCSSMNAYTL SRAAQQGYID SHYSAVAAKA YQGVLARISL SKGLTNLTNI SVGTNVGDYS
YYIGRTQATN DFHGLGSFLI MNEQFVRAGG S
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