| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5369 |
|---|
| Symbol | |
|---|
| ID | 8336723 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 6190649 |
|---|
| End bp | 6191455 |
|---|
| Gene Length | 807 bp |
|---|
| Protein Length | 268 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 644958467 |
|---|
| Product | transcriptional regulator, DeoR family |
|---|
| Protein accession | YP_003116069 |
|---|
| Protein GI | 256394505 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
|---|
| COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.268088 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGAAG AACTGCTCGA CGCGGTCCTC CCCGAGGAGC GCCGCCTGCG CATCGCCGCA
CAGCTGCGCC GCGACACCCG GGTCCGCGTC GAGGACCTGG CCGCGCGGTA CGGCGTCTCC
GGCGAGACCA TCCGCCGCGA CCTGCAGGTG CTGGAGGAGC GCGGCATCCT GCGCCGGGTC
TACGGCGGCG CCGTCGCGCA GGAGTCGCGC GGCTGGGAGC CCGGCGCCGA CGAGCGGGCC
ATCGCCCGGC TGGACCCCAA GCGGGCCATC GCCGCGGCCG CCGCCGCGCT GGTCGAACCG
GGCGAGACGC TGGTGTTCGA CCTGGGCACG ACGGTCGCCG AGACGGCGCG CGCCCTGCCG
GCCACCTTCA GCGGCCGGGC GCTGTGCGTC GCGCTGCCGA CCGCCGCGGA GCTGGCCGGG
CGCGAGGGCG TGGAGGTGCA CCTGGCCGGC GGTCAGGTGC GGCGCGGTGA CCTGGCGTGC
GTGGGTCCGG GCTCGGAGAA GTTCTTCGAG CGCTTCTTCG CCGACCGTGC GTTCATCGCC
GCTTCCGGCG TGCACCTGAA GGCTGGAGTG ACCAGCGACC GGCTGGAGGA GATCCCGGTC
CGGCAGGCGA TCCTGGGCCA GGCGCAGGCT GTATACGTGC TCGCCGACGG CGCCAAGCTG
GGCCGGGTCG CGGTCGGCCG GGTGTGCCAG CTGTCCGCGG TCACCGCGAT CGTCACGGAC
TCCGGCGCCG ACCCGGAGGC GGTGCGGGCG CTGGAGCAGA GCGGGACCCG GGTGATCGTG
GCGCCGACCG GCTCGGAGCT GGACTGA
|
|---|
| Protein sequence | MKEELLDAVL PEERRLRIAA QLRRDTRVRV EDLAARYGVS GETIRRDLQV LEERGILRRV
YGGAVAQESR GWEPGADERA IARLDPKRAI AAAAAALVEP GETLVFDLGT TVAETARALP
ATFSGRALCV ALPTAAELAG REGVEVHLAG GQVRRGDLAC VGPGSEKFFE RFFADRAFIA
ASGVHLKAGV TSDRLEEIPV RQAILGQAQA VYVLADGAKL GRVAVGRVCQ LSAVTAIVTD
SGADPEAVRA LEQSGTRVIV APTGSELD
|
|---|
| |