Gene Caci_5358 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5358 
Symbol 
ID8336712 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6177098 
End bp6177637 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content69% 
IMG OID644958456 
Producthypothetical protein 
Protein accessionYP_003116058 
Protein GI256394494 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.720359 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACG ACCTGCCCGC CGACGTCACG GCGCTGATCG ACCGCACCTG CTACGAGGAG 
GCCGCCGACT TCCCCGTGGA GCGCGGCTAC GTCTGGACCT CGTGCGCCTC GGTCGAGAAC
GGCAATCCGC TGTTCTGGGA CGAGACCGCC GCCGCGGAGA TCACCGGCGG GCCGATCGCG
CCGCCGTCGA TGCTGTCGAC GTGGTTCCGT CCGCACCACT GGACGCCCGG GCAGGACGAG
CCGAAGCTGC CGCTCCAAGT CCACTTCGAC CTCAAGAAGC GGCTGGACCT GCCCGAGGCG
ATCATCGCGG AGTTCACCAC GGTGTTCCAC GAGCCGGTCC GGCCCGGAGA CGTCCTGACC
ACCTGCCAGC GGCTGCGCTC GGTGAGCGGC GTCAAGACCA CGAAGCTGGG GCGCGGGCGG
TTCTGGACCA TCGACGTCGA ATACCGCAAC GTGCGCGGCG AGCTGTGCGG GGTCGAGTCC
TACACCGGCT TCGGCTACAA CCGGCAGAAC GCGCAGAACC GGCAGGAGCA GAGCGCATGA
 
Protein sequence
MTDDLPADVT ALIDRTCYEE AADFPVERGY VWTSCASVEN GNPLFWDETA AAEITGGPIA 
PPSMLSTWFR PHHWTPGQDE PKLPLQVHFD LKKRLDLPEA IIAEFTTVFH EPVRPGDVLT
TCQRLRSVSG VKTTKLGRGR FWTIDVEYRN VRGELCGVES YTGFGYNRQN AQNRQEQSA