| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5351 |
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| Symbol | |
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| ID | 8336705 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 6166930 |
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| End bp | 6168402 |
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| Gene Length | 1473 bp |
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| Protein Length | 490 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644958449 |
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| Product | protein of unknown function DUF35 |
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| Protein accession | YP_003116051 |
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| Protein GI | 256394487 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG3425] 3-hydroxy-3-methylglutaryl CoA synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.648727 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAGGAA TCCTGGGGTG GGGCGTCCAC CTGCCGTACC GCCGCCTGGA CCGCACCGGC
ATCGCCGCCG TGGCGGGCAC CGGCGGCGGA ACCGGTACCC GCGCCGTGGC CTCCTACGAC
GAGGACACCA CGACCATGGG CGTCGCCGCC GCCCGCGCCG CCCTGCACCC GGCGGGACCA
GGCGGCGACA CCGCCGAGAG CATCAGAACC CTGTGGTTCA GCACCACCGC CCCCGCCTAC
CAGGACCGCA CCAACGCCAC CGCCCTGCAC GCCGCCCTCC GCCTCCCCCG CACCACCGCC
GCCTACGACG CCACCGGAGC CGTACGCTCC GCCGTAGCCG CCCTCGACGC CGCCCTGACC
GCGGCCGAGG GAACCCACCT CGTCGTCGCC TCCGACCTCC GCACCGGCCG CCCGGGCAGC
GCCGATGAAG CCGCCGGAGG GGATGCAGCA GTAGCACTAC TCATCGGCGA TAGCGATAGC
GATGAAGTAG AGACCCCAAA CCACCCCGTC CTAGCCCACC TCCTCGCCCA CACCGCCACC
ACCGAGGAGT TCCTCGACCG CTGGCGCGCC CCCGGCGATC AGACCTCGAA GACGTGGGAA
GACCGCTTCG GCGAGACCCG CTACACCACC CTCGCCGCCG AAGCCTGGAA CGCCCTCCTG
GCGACGGCGA ACATCACCCC CGACGGCATC GACCTCCTCG TGATCGCCGC CACCCACGAA
CGCGCCGCGA AGTCGGCCCT GAAGAAGACC GGCGTCCCCG CCGCACGCCA CCACGACCCG
TTCGCCAAGA CCATCGGCAC CACCGGTGCG GCCCACCCCG CCCTCCTCTT GGCCTCAGCC
CTCGAAGCCG CCCGCCCCGG CCAGACCATC GCCCTGCTCG TCCTCGCCGA CGGCGCCGAC
GCCTTCCTGT GGCGCACCAC CGAAGCCCTC GCCGCCTACC GCCCCGCGCG CCCCGTCGCC
GACCAGATCG CCCAGTCCGG CGCCGTCCCC TACGGCCGCT ACCTCGCCTG GCGCGGTTTC
CTCCCGGTCG AGCCGCCCCG GCGCCCCGAG CCCGCGCGCA CCTCCGCCTC GGCCGCCGCC
CGGGCCGCCG ACTGGAAGTT CGCGTTCGTC GGTTCTCAGA ACGCCGACGG CGGCGCCGTG
CACCTGCCGC CCTCCCCCTT CGACCACGCC CCGCACCCCG CCGCGGACGC CGAGGGCACC
ATCGTCACCT TCACCGTCGA CCGCCTCGCC TCCTCCCCCA GCCCGCCGGT CGTGTTCGCG
GTCGTCGACT TCGACGGCGG CGGACGCCTG CCGATCGAGC TGACCGACGT CGACGCCGAC
GAGGTCGCGA TCGGCCTGCG CGTGGAGGCC ACCTTCCGCC GCCTGAGCAG CGCCGACGGC
ATCCACAACT ACTTCTGGAA AGCGCGCCCG GTCCGCCGCG CCGGCCACTC CCACCCCGTC
CACCCCGTCC ACTCCGAGCA GGAGACCCGC TGA
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| Protein sequence | MRGILGWGVH LPYRRLDRTG IAAVAGTGGG TGTRAVASYD EDTTTMGVAA ARAALHPAGP
GGDTAESIRT LWFSTTAPAY QDRTNATALH AALRLPRTTA AYDATGAVRS AVAALDAALT
AAEGTHLVVA SDLRTGRPGS ADEAAGGDAA VALLIGDSDS DEVETPNHPV LAHLLAHTAT
TEEFLDRWRA PGDQTSKTWE DRFGETRYTT LAAEAWNALL ATANITPDGI DLLVIAATHE
RAAKSALKKT GVPAARHHDP FAKTIGTTGA AHPALLLASA LEAARPGQTI ALLVLADGAD
AFLWRTTEAL AAYRPARPVA DQIAQSGAVP YGRYLAWRGF LPVEPPRRPE PARTSASAAA
RAADWKFAFV GSQNADGGAV HLPPSPFDHA PHPAADAEGT IVTFTVDRLA SSPSPPVVFA
VVDFDGGGRL PIELTDVDAD EVAIGLRVEA TFRRLSSADG IHNYFWKARP VRRAGHSHPV
HPVHSEQETR
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