Gene Caci_5322 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5322 
Symbol 
ID8336676 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6136379 
End bp6137341 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content70% 
IMG OID644958420 
Producttranscriptional regulator, MerR family 
Protein accessionYP_003116022 
Protein GI256394458 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAAG CCCTCTACAC CATCGGCGAC TTGGCGCGGC GCACCGGACT GCCGGTGAAG 
ACCATCCGCT TCTACGCCGA CGAGGGCATC GTCCCCGAAA CCGGCCGCAC CCCGGCCGGC
TACCGCGTCT ACGACATCGG CGCCATAGCC CGCCTGGACC TGGTCCGCAC CCTGCGCGAG
CTCGGCGTGG ACCTCCCGAC CGTCCGGCGC GTGCTGGCGC GCGAGACGAC ACTGGCCGAG
GTCGCAGCCG CGCACGCGGA GGCACTGGAC GTCCAGCTTC GCACACTGCG ACTCCGGCGC
GCGGTGCTCG GCGCGGTAGC CGCCCGGGGT GCCACCCACC AGGAGATGGA CCTGATGCAC
AGAATCGCCC GCATGTCCGA CCTCGAACGC AAGCGCGTCA TCGAGGACTT CATCGAGGAC
ACCTTCAGCG GCATCGACGC GAACCCAGAG CTCGTCGAAC TGGTCCGCGC CGCCACCCCC
GACCTCCCCG ACGACGCCAC CCCCGAGCAG GTCGAAGCCT GGATCGAACT CGCCGAACTG
ACCCAGGACC CAGACTTCCG CACCAGCGTC CGCGCGATGG CCCAGTACCA AGCCGCCGAA
CGCGCCGAAG GCGACACGAC AGGCCTGCAC CACGAACTGA CAGCCCTGGT CCGCGAACGC
ATCACCCAAG CCATCACCGA CGGCATCGAC CCGCAATCCC CCGCCGCCGA CCCCATCATC
GCCGAGCTCG GAGCCCAATA CGCCACCACC TTCGGCAAGC CAGACGACCC GGCCCTGCGC
GCATGGCTAT GGCGCCGCCT GGAGGTAGCA GCCGACCCCC GCGTGGAACG CTACTGGCGC
CTCCTCGCAG CGGTGAACCG ATGGCCGGAG CCGGAGACCC TCGGCCCGGT GTTCGAGTGG
TTCCAGCGCG CTCTCCGGGT CCGGATGGGG CACTTGGAGC GGGACGGGGC AGGCGGGGAG
TAG
 
Protein sequence
MSEALYTIGD LARRTGLPVK TIRFYADEGI VPETGRTPAG YRVYDIGAIA RLDLVRTLRE 
LGVDLPTVRR VLARETTLAE VAAAHAEALD VQLRTLRLRR AVLGAVAARG ATHQEMDLMH
RIARMSDLER KRVIEDFIED TFSGIDANPE LVELVRAATP DLPDDATPEQ VEAWIELAEL
TQDPDFRTSV RAMAQYQAAE RAEGDTTGLH HELTALVRER ITQAITDGID PQSPAADPII
AELGAQYATT FGKPDDPALR AWLWRRLEVA ADPRVERYWR LLAAVNRWPE PETLGPVFEW
FQRALRVRMG HLERDGAGGE