Gene Caci_5295 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5295 
Symbol 
ID8336649 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6100010 
End bp6100513 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content73% 
IMG OID644958393 
Producttranscriptional regulator, MarR family 
Protein accessionYP_003115995 
Protein GI256394431 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.564474 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGAGT CGAACCAACT ATCCGGGCTG CCCGCGGAGC GGGTGGTCGA CGCCGTCCAG 
GTGCTGGTGC GCCTGCGGCG GTCGTTGGAG CGGGTGGAGA CCGGCTTGAG CCTGCCGCAG
TACCAGTTGC TGTCGATGGT GCGGGAGGGC GGCGAGCGGT CGGCGCGGTT GGCGGACCGG
CTCGCCGTGC GCAAGCCGAC GCTGACCGCC GCCGCCGATG CGCTGGTGGC TGCCGGGCTG
TTGGAGCGCG AGGCTGACCC TGGAGACCGC CGCGTCGTGC GGGTACGGAT TACCGAGGCC
GGATTGGCTG CTGTACGGAG TGCCGAGGAA CAGCTGGCCG CCGCGTTGGC GCCGCTGTTC
GGGGAGGCGG CCTCGCAGCT GACCGGCGGT GGCGAGGCAC TGCTGGACTG CTTCGACGCA
CTGGGCGGAG CCCTCGACCG GCGATTCGCC GAGCACCGGG CCCGCCACAT GGCCGCGCAG
GCAGAGGCGG CCCGCGACGA GTAG
 
Protein sequence
MSESNQLSGL PAERVVDAVQ VLVRLRRSLE RVETGLSLPQ YQLLSMVREG GERSARLADR 
LAVRKPTLTA AADALVAAGL LEREADPGDR RVVRVRITEA GLAAVRSAEE QLAAALAPLF
GEAASQLTGG GEALLDCFDA LGGALDRRFA EHRARHMAAQ AEAARDE