| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5249 |
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| Symbol | |
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| ID | 8336603 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 6045075 |
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| End bp | 6045953 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644958347 |
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| Product | DNA polymerase LigD, polymerase domain protein |
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| Protein accession | YP_003115949 |
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| Protein GI | 256394385 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3285] Predicted eukaryotic-type DNA primase |
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| TIGRFAM ID | [TIGR02776] DNA ligase D
[TIGR02778] DNA polymerase LigD, polymerase domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.398866 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTCCTG ACGCGCGAGC TTCGCAGACC GTCGAGATCG ACGGCCGCTC GGTGAAGCTG
ACGAACCTGG ACAAGGTCCT GTATCCGGAC GACGGCTTCA CCAAGGGCGA GATCCTCGAC
TACTACGCAC ACATCGCACC GGTGATGCTG CCGCACCTGG CCGGCCGCCC GGTGACGTTC
ATCCGCTACC CGGACGGCGT GGACACATCA GGGTTCTTCG CCAAGCACGC CCCGGCGCAC
CGCCCGTCCT GGATCCGCAC CGCCGACATC GCCGCCACCA GCTCCGGCAA GCAGGTCGAG
TACGTCCTCA TCGACGACCT GCCCTCCCTG ATGTGGGCAG CGAACCTGGC CGCGATCGAG
TTCCACGTAC CCCAATGGCG CGTCTCGGAC CAGCAACACC ACGACCTGCT GGTCCTAGAC
CTGGACCCAG GCGCACCGGC CACAGTCGTG GACTGCGTCC GCGTCGCACT CGCCGCCCGC
GACCTGTTGG CCACGCACGA CCTGGAGCTG CGCGCAAAAA CCTCCGGAGC CAAGGGCCTC
CACCTGTACG CAGCACTGAC CGACGTCACC GGCGAGCAAG CCCGCGAACT CGCACACACC
ATCGCCCGCG CCCTGGAAGG CACGCACCCC GACCTGGTGG TATCGAGCAT GTCCAAGGCG
GAACGCCCCG GAAAGGTATT CGTCGACTGG TCACAAAACA CCCACGCCAA GACCACCATC
GCGCCCTACT CCCTACGCGC CACACCGCAC CCAGCGGTGT CGACCCCGGT GACCTGGGAG
CAACTAGCGG CAGCAAAACA TCCCGAGGAC CTGCGCTTCC CCCCGGCACG CGCACTGGAA
CAGGTCGCCG AGCACGGCGA TTTACTATCA GGGCTGTGA
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| Protein sequence | MSPDARASQT VEIDGRSVKL TNLDKVLYPD DGFTKGEILD YYAHIAPVML PHLAGRPVTF
IRYPDGVDTS GFFAKHAPAH RPSWIRTADI AATSSGKQVE YVLIDDLPSL MWAANLAAIE
FHVPQWRVSD QQHHDLLVLD LDPGAPATVV DCVRVALAAR DLLATHDLEL RAKTSGAKGL
HLYAALTDVT GEQARELAHT IARALEGTHP DLVVSSMSKA ERPGKVFVDW SQNTHAKTTI
APYSLRATPH PAVSTPVTWE QLAAAKHPED LRFPPARALE QVAEHGDLLS GL
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