| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5237 |
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| Symbol | |
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| ID | 8336591 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 6028149 |
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| End bp | 6030377 |
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| Gene Length | 2229 bp |
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| Protein Length | 742 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644958335 |
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| Product | alpha-L-fucosidase, putative, afc95A |
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| Protein accession | YP_003115937 |
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| Protein GI | 256394373 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.139912 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACACC TGCTGTGGTA CGACGCCCCG GCCAGCGACT GGGAACGCGA GGCGCTGCCG
ATCGGGAACG GTCGGATCGG CGCGATGGTC TTCGGCGGGG TCGCCGCCGA GCGCGTCCAG
TTCACCGAGG AGACGCTGTG GACCGGGGGA CCGGGGCACC CCGGCTATGA CCACGGCGAC
TGGCGCGAAC CCCGGCCCGG CGCGCTGGAG GAGGTGCGGC GGCGCATCGA CGAGCACGGC
TCGCTGCCGA CGCAGACCGT CACCGAACTG CTCGGGCAGC CCAAGACCGG CTTCGGTGCT
TTCCAGAACT ACGGCGACCT GATCATCGAG TTTCCGGGAC TGAGCGAAGA GGCCCAGGAC
TACCGCCGCA CCCTCGACAT CTCCGACGCC CTCGCCGGAG TCGCCTTCGA GGCGGACGGC
GTGCACCACA CCCGCGAGTA CTTCGTCAGC CACCCGGCAG GTGTCCTGCT CGGCCGGCTG
ACCGCCGACC AGCCCGGCGC GCTCCACTGC GTCCTGCGCT ACGAACCCGG CACCGACGCC
ACCGACGCCA CGCGCGTCAC CACCGAGGAC GCCACCCTCG TCATCATCGG CGCCCTGCCC
GACAACGGCC TGCGCCACGC CGCCCGCATC AAGGTGATCC CGGAAGGCGG CCGCCTGATC
GAGGGCGAAG ACCGGCTCAC CATCGAGGGC GCCGACCGCG TCGTCATCAT CCTGGCCGCC
GCGACCGACT ACGCCGACAC CTATCCCGCC TACCGCAACG GCATCGACCC CGCCGGCCCG
GTCGCCGAAG CCGTCGCCAA AGCAGCGGCC AGCACCTACG ACGACCTCCG TGCCGCGCAC
ATCGCCGACC ACAGCGCCCT GTTCGATCGC GTCGTCCTGG ACCTCGGCGG CAGCCTGCCA
GGCGACGTCC CCACCGACCG CCTCCTGACC GCCTACGGCA CCGACGCCTC CACCCCGGCC
GCCGACCGCG CCCTGGAGCA GCTGTTCTTC GACCACGGCC GCTACCTGCT CATCGCCTCC
TCCCGCCCGG CGAGCCAGCT GCCCGCGAAC CTGCAGGGCG TCTGGAACGC CTCGCCGACG
CCGCCATGGG CCGGGGACTA CCACGTCAAC ATCAACCTGC AGATGAACTA CTGGCTCGCC
GAACCGTGCG CGCTGGGGGA GTGCGCCGAG CCGCTGTTCG CCTACATCGA GGCGTTGCGC
GCGCCGGGCC GGGTCTCAGC CCGCACACTG TTCGGCACCG AAGGCTGGGT GGTGCACAAC
GAGACGACGC CCTTCGGCTT CACCGGCGTG CACGACTGGC CGGACGCCTT CTGGTTCCCG
GAGGCTGCGG CGTGGCTGTG TCGTCACCTG TGGGAGCACT ACGCCTTCAC CCTCGACGAG
GAGTTCCTGA AGGAGCGCGC CTATCCGGTG ATGAAGGAGG CGGCGCAGTT CTGGCTCGCG
AACCTGCGCC GCGATCCCCG CGACGGCAAG CTCGTGGCGA ACCCGAGCTT CTCCCCGGAG
CAGGGCGAGT ACACCGCGGG CTCGGCGATG GCCCAGCAGA TCATCCGCGA CCTGTTCAAG
AACACGGTCG GGCTGGCCGC CGAGGTGGAA GATCTGGACA CCGGACTGCG CATCGGTTCC
TGGGGGCAGT TGCAGGAGTG GAAGGAAGAC CTCGACGACC CGCAGAACCA GCACCGCCAT
GTCTCGCAGC TGTACGCGCT GCACCCGGGC TCGGACATCG ATCCGCTCCG GGACGAGGAT
CTCGCGGCTG CCGCCCGCAC CATCCTGAAC GCCCGCGGCG ACGGCGGCAC CGGCTGGTCC
AAAGCCTGGA AGATCAACTT CTGGGCTCGT CTGTGGGACG GCGACCACGC CCACCGCCTG
CTGGCCGAAC AACTCACCGG CAGCACCCTG CCGAACCTGT TCGACACCCA TCCGCCCTTC
CAGATCGACG GCAACTTCGG CGCGACCGCC GGTATCGCCG AGATGCTGGT GCAGAGCCAC
CTCGGGGAGA TCAGGATCCT GCCATCGCTG CCCGCGGCGT GGCCGACCGG TTCAGTGACC
GGCTTGCGGG CGCGCGGGGC GGTGCGTGTC GACGTCGCCT GGGCCGAGGG GAAGGTCACC
GAGATCTCGG TGACGCCGGA CCGCGACGGC GAGCTCGACC TGCGCTCGCC CCTGTTCGGG
ACCGCGGCGC GTATGCGGTT CTCTGCCGAG GCCGGGCGCA CCTACGTGTG GAAAGAAGAG
ATCAAATAA
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| Protein sequence | MEHLLWYDAP ASDWEREALP IGNGRIGAMV FGGVAAERVQ FTEETLWTGG PGHPGYDHGD
WREPRPGALE EVRRRIDEHG SLPTQTVTEL LGQPKTGFGA FQNYGDLIIE FPGLSEEAQD
YRRTLDISDA LAGVAFEADG VHHTREYFVS HPAGVLLGRL TADQPGALHC VLRYEPGTDA
TDATRVTTED ATLVIIGALP DNGLRHAARI KVIPEGGRLI EGEDRLTIEG ADRVVIILAA
ATDYADTYPA YRNGIDPAGP VAEAVAKAAA STYDDLRAAH IADHSALFDR VVLDLGGSLP
GDVPTDRLLT AYGTDASTPA ADRALEQLFF DHGRYLLIAS SRPASQLPAN LQGVWNASPT
PPWAGDYHVN INLQMNYWLA EPCALGECAE PLFAYIEALR APGRVSARTL FGTEGWVVHN
ETTPFGFTGV HDWPDAFWFP EAAAWLCRHL WEHYAFTLDE EFLKERAYPV MKEAAQFWLA
NLRRDPRDGK LVANPSFSPE QGEYTAGSAM AQQIIRDLFK NTVGLAAEVE DLDTGLRIGS
WGQLQEWKED LDDPQNQHRH VSQLYALHPG SDIDPLRDED LAAAARTILN ARGDGGTGWS
KAWKINFWAR LWDGDHAHRL LAEQLTGSTL PNLFDTHPPF QIDGNFGATA GIAEMLVQSH
LGEIRILPSL PAAWPTGSVT GLRARGAVRV DVAWAEGKVT EISVTPDRDG ELDLRSPLFG
TAARMRFSAE AGRTYVWKEE IK
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