| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5234 |
|---|
| Symbol | |
|---|
| ID | 8336588 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 6025517 |
|---|
| End bp | 6025933 |
|---|
| Gene Length | 417 bp |
|---|
| Protein Length | 138 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 644958332 |
|---|
| Product | thioesterase superfamily protein |
|---|
| Protein accession | YP_003115934 |
|---|
| Protein GI | 256394370 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0824] Predicted thioesterase |
|---|
| TIGRFAM ID | [TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCTTCT CGGTACCGAT CACCGTCCGC GGCTATGAGC TGGACACCCA GGGCCACCTC
AACCAGGCCG TCTACATCCA GTACTCCGAG CACGCCCGCT GGGAGATGCT GGCCGCCGCC
GGCATCCAGC AGAACGCGAT GGTCGAGAGC GGCATCGGCC CGGTGGCGCT GGAGGTGAAC
GTGAAATACC TGCGCGAACT GCGCGGCGGC GAGCAGGTGG ACGTCACCTG CGAGTTCGCC
TGGGCCGAGG GCAAGGTCTT CCAGCTCAAG CAGCAGATCC TGAAGAAGGA CGGCACGCTC
TGCGCCGACA TCGTGGTGAC CGGCGGGGTC CTGGACCTGA AGGCGCGCAA GCTGGTGCCG
AACCCGGCGG AGCGGTTCGC GGCGCTGGCG AGCGACCCGG CGCTGCTGGG GATCTGA
|
|---|
| Protein sequence | MVFSVPITVR GYELDTQGHL NQAVYIQYSE HARWEMLAAA GIQQNAMVES GIGPVALEVN
VKYLRELRGG EQVDVTCEFA WAEGKVFQLK QQILKKDGTL CADIVVTGGV LDLKARKLVP
NPAERFAALA SDPALLGI
|
|---|
| |