| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5228 |
|---|
| Symbol | |
|---|
| ID | 8336582 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 6017877 |
|---|
| End bp | 6019028 |
|---|
| Gene Length | 1152 bp |
|---|
| Protein Length | 383 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644958326 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003115928 |
|---|
| Protein GI | 256394364 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.160159 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGGGC CTGCGGCTGC GGCAGGGCTT GCTGATGCGC GGGCGGCACG GGTGGCTGGT
GGCGCCGATA TGTCCGCAGC CGCAGCTGAT CCAGCGGCGA CTGTGGCGGC GATGGCGGGG
GCGCATGCGC AGATCATGTC GGCGGCTGAG TTGTCGGTGG CGTTGCGGAT GGTGGGGGCG
AGGGCTGGGG ATGTCAGGGG TGCGGTGTGG GGTGAGCGGA GTCTGACCAA GACTTTTGGG
CCGCGGGGGA CCGTTCATCT GCTGCCGACT GCTGAGTTGG GTGCTTGGCT TGGTGCGTTG
TCGGCGTTGC CGCCGATTGT TGAGCGCTTT CCTGCCGATG TGCGGCTGAC GCCTGATCAG
CTTGATGCCG TTCTCGCCGC TGTCGGGACG GCGCTCGCCG GTACCGAGCT GACCGTCGAT
GAGCTTGATG CGGCTGTCGG CGAGCTGACC GGGCCGTGGG CGGTCGAGGA AGTGATGCCC
GCGTTCCAGA CGATGTGGCC GCGCTGGCGG CAGGCGATGG GGATGGCCGC GCATCGGGGT
GTGCTCTGCT TCGGGGCGGG ACGCGGTCGG AAGGTCACGT ATACGAATCC TGATGTGAAG
CCCGCGGCCG CGGACGATGC GCTGGCGACC GTGGTCGGCG ACTACCTGTG GTCCTACGGC
CCGGCGACGC CGCCGCAGTT CGCCAAGTGG TTCGGGGGGA CGCCGGCGTG GGGCGCAGAG
GTGTTCGCGC GGTTGGCGAG CGCCGGGAGT ATTGAAGAGG TCGATTTCGA TGGCGCCTCC
GCCTGGGTAG CAGCCGGGGA TACCGCTTTC GAAGACACCG AACCGGCGGG TGTCCGGCTG
CTTCCCTACT TCGATGCGTA CGGCGTCGCC GGTCAACCCC GCGACCAGCT TTTCCCCGGA
CGCGCCGCCG AGCGTGCCCT GACCCGGGGT CAGGCGGGCA ACCGCCCGAT CCTGCTGGTG
GACGGCGTCG TCGCGGGGAT CTGGCATCTG CGCCGCTCCG GACGCCGGGC GACCGTCACG
GTCGAGGCGT TCCGCACGCT GAACCGCGCA CACAGCGCCG CACTCGAGCA GCAGGTGGCG
CGCGTCGCAG AGATCTTGGA TCTGGCCTCG GAGCTGGTGC TCGGCGAGGT CGAGGCGGGT
CCCCATGCCT GA
|
|---|
| Protein sequence | MAGPAAAAGL ADARAARVAG GADMSAAAAD PAATVAAMAG AHAQIMSAAE LSVALRMVGA
RAGDVRGAVW GERSLTKTFG PRGTVHLLPT AELGAWLGAL SALPPIVERF PADVRLTPDQ
LDAVLAAVGT ALAGTELTVD ELDAAVGELT GPWAVEEVMP AFQTMWPRWR QAMGMAAHRG
VLCFGAGRGR KVTYTNPDVK PAAADDALAT VVGDYLWSYG PATPPQFAKW FGGTPAWGAE
VFARLASAGS IEEVDFDGAS AWVAAGDTAF EDTEPAGVRL LPYFDAYGVA GQPRDQLFPG
RAAERALTRG QAGNRPILLV DGVVAGIWHL RRSGRRATVT VEAFRTLNRA HSAALEQQVA
RVAEILDLAS ELVLGEVEAG PHA
|
|---|
| |