| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5196 |
|---|
| Symbol | |
|---|
| ID | 8336550 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 5972976 |
|---|
| End bp | 5973389 |
|---|
| Gene Length | 414 bp |
|---|
| Protein Length | 137 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644958294 |
|---|
| Product | thioesterase superfamily protein |
|---|
| Protein accession | YP_003115896 |
|---|
| Protein GI | 256394332 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
|---|
| TIGRFAM ID | [TIGR00369] uncharacterized domain 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.156162 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.866385 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCACCC TCGACATCGG AACGGCGCGC ATGGTGTTAG CCGCGCAGCC GTTCAGCGTT
TTGCTCGGGG CCCGGCTGGA GGTCTTCGAA AAGGGGCGCG CGATCCTAGC GGTCCCCATG
CGCGAAAACC TCAAGCAGCA GAACGGGTTC CTGCACGGCG GAGTCCTCGC CTACGCGGCG
GACAACGCCA TCACCTTCGC GGCCGGCTCG ACGCTCGGCC CGGAGGTACT CACCAGCGGA
GTCACCATCA GCTATGTGCG GCCGGCGTCC GGGGTGACGC TGCGGGCCGA GGCTGAGGTC
ACCTACACCG GACGACGCCA GGCCGTGTGC CGGTGCGACC TGTACGCCGT GGCGGAGGAC
GGCGCACGGG TCCTCAGCGC GGTGGCCCAG GGTTCGGTGC TCTGTGTGTC CTGA
|
|---|
| Protein sequence | MVTLDIGTAR MVLAAQPFSV LLGARLEVFE KGRAILAVPM RENLKQQNGF LHGGVLAYAA
DNAITFAAGS TLGPEVLTSG VTISYVRPAS GVTLRAEAEV TYTGRRQAVC RCDLYAVAED
GARVLSAVAQ GSVLCVS
|
|---|
| |