| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5181 |
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| Symbol | |
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| ID | 8336535 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 5954354 |
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| End bp | 5956189 |
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| Gene Length | 1836 bp |
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| Protein Length | 611 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644958279 |
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| Product | ABC transporter related |
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| Protein accession | YP_003115881 |
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| Protein GI | 256394317 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGCGG CACCCGCGCC ACCAGTGACC GCGACCACTG CCACGACGAC GACCACGGCC
ACGACCCAGC CCGGCGGCCG CGAGGCCCTG CCGATCGCCA CCTCTGCCGA GGTGCGCCAG
TACGCCGCGC GGGTCGCCCG CATTCGCGGC CGCGACCTGG TCCTGACCGT CGGGCTGTTC
GCCCTGGCCG CGGTCGCCGG GCTGTTCGGG CCGCGGCTGC TCGGCTCGCT GATCGACGGC
GTGCAGAAGG GCACGACCGC AGGGCACGTG GACACCATCG TCGCCCTGAT CGCGCTGTTC
CTGATCGTGC AGACCGTGCT GACGCGCTAC GCGAAGCTGG CCGCCGGCAA GTTCGGCGAG
GGCGTGCTGG CCGAGCTGCG CGAGAACTTC GTGTCCCGGG TCCTGGAGCT GCCGCTGTCC
GTGGTGGAGC GCGCCGGCAG CGGCGACCTG CTCTCGCGCT CCTCGCGGGA CGTGGACATG
CTGAGCATGG CCGCGCGCTA CGCGGTGCCC ACCACGCTGG TCGCCATCGT CACGGTCCTG
CTCACCATCG GCGCCCTGGC GCTGGTGAGC CCGTGGGCGG TGCTGCCGCT GCTGGTCATC
GTGCCGCCGA TCGGGGTGGT GTTCCGCTGG TACATGAAGC GCGCGCCGGA GGGCTACCTG
GCCGAGAGCG CGCGCTACGC CGATCTGACC GACAGCCTGG CCGAGACGGT CGACGGCGCG
CGCACCGTGG AGGCGCTCGG CCTGCAACGG CACCGGATCG AGCGCACCGA CGAGGAGATC
CGCCGCCAGT TCGCCGCCGA GCGCTACACG CTGCGGCTGC GCTGCGTGTT CTTCCCGACC
GCAGAGTCCT GCTACATCGT TCCGGTCGCG CTGACGCTGC TGTTCGGCGG CCTGGGCTAC
GTCCACGGCT CGTTCACCCT GGGCCAGGTC ACCGCGGCCA CGCTGTACAT GCAGCAGATC
ATGGGCCCGA TCGACGAGAT GCTCGCCTGG GCTGACCAGC TGCAGGTCGG CGGCGCCTCG
CTGGCGCGGC TGCTCGGCGT GGCCGGCGTC CCGGCCGACC GCCAGGCCTC CGGGGAGCAG
CCCGAGGGCG AGGACCTGCG CGCCACCGAC GTGCGCTACT CCTACATCCC CGGCCGCGAA
GTCCTGCACG GCGTGGACCT GTCCCTGCGC GCCGGCGAGC GCCTGGCGAT GGTCGGACCC
TCCGGCGCGG GCAAGTCCAC CCTCGGCCGC CTGCTCGCCG GCATCCACGG CCCGACCGTC
GGCTCGGTCG CCGTCGGCGG CGTCCCGCTG GTCGAACTCC CGCTCGCGGA CCTGCGCGGC
CAGGTCGCGC TGGTGAATCA GGAGCACCAC GTGTTCGCCG GCACGGTGCG CGAGAACGTG
GTCCTCCCGC GCCCGGAGGC CACCGAGGAG CAGGTCCGCG AAGCCCTCGC CGCCGTCGAT
GCGCTGACCT GGGTAGAGGC CCTGCCCGAA GGCCTCCAGA CCCCGATCGG CGCCAACGGC
CAGACCCTGT CCCCGGCCCA AGCCCAGCAA CTGGCCCTGG CCCGCCTGGT CCTGGCCGAC
CCGCACACCC TCGTGCTCGA CGAGGCGACC TCGCTGATCG ACCCCCGAGC CGCCCGCCAC
CTGGAACGCT CCCTGGCAGC GGTCCTCGAG GGCCGCACGG TGATCGCCAT CGCGCACCGC
CTGCACACCG CGCACGACGC GGACCGCGTG GCGGTGGTCG AGGACGGCGT GATCGCCGAA
CTGGGCAGCC ACGAGGAGCT GGTCGAGACC GGCGGAGCTT ACGCCGGACT CTGGGATTCC
TGGCACGGAC GCGGGGCGGC CGCGGAGCAG GTGTAG
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| Protein sequence | MAAAPAPPVT ATTATTTTTA TTQPGGREAL PIATSAEVRQ YAARVARIRG RDLVLTVGLF
ALAAVAGLFG PRLLGSLIDG VQKGTTAGHV DTIVALIALF LIVQTVLTRY AKLAAGKFGE
GVLAELRENF VSRVLELPLS VVERAGSGDL LSRSSRDVDM LSMAARYAVP TTLVAIVTVL
LTIGALALVS PWAVLPLLVI VPPIGVVFRW YMKRAPEGYL AESARYADLT DSLAETVDGA
RTVEALGLQR HRIERTDEEI RRQFAAERYT LRLRCVFFPT AESCYIVPVA LTLLFGGLGY
VHGSFTLGQV TAATLYMQQI MGPIDEMLAW ADQLQVGGAS LARLLGVAGV PADRQASGEQ
PEGEDLRATD VRYSYIPGRE VLHGVDLSLR AGERLAMVGP SGAGKSTLGR LLAGIHGPTV
GSVAVGGVPL VELPLADLRG QVALVNQEHH VFAGTVRENV VLPRPEATEE QVREALAAVD
ALTWVEALPE GLQTPIGANG QTLSPAQAQQ LALARLVLAD PHTLVLDEAT SLIDPRAARH
LERSLAAVLE GRTVIAIAHR LHTAHDADRV AVVEDGVIAE LGSHEELVET GGAYAGLWDS
WHGRGAAAEQ V
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