Gene Caci_5170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5170 
Symbol 
ID8336524 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp5941957 
End bp5943255 
Gene Length1299 bp 
Protein Length432 aa 
Translation table11 
GC content71% 
IMG OID644958268 
Producthypothetical protein 
Protein accessionYP_003115870 
Protein GI256394306 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAACGCC GAACGACGCC CCGGATCATC GCCGCCCTCG TGCTCGTCGC GGGTGTGCTG 
ACGCCGTCCG CCGTGGCCTC CGCCGCGACC GCCGCGCATC AGGGCCCGGC CCTCCGTCCG
CTTCCGGTGC CGGCGACGGT CGTCCTGGAC GGCTACCGGC TGGCGCTGAC CCGGGACCTG
GTGCGGGTCG GGCTGCCGTC GCTGAACGCG CCGCTGGCCG AGCTGCGCAC CCAGGCCGAC
GCCGCCCTGA CCGCCGGGCC CTGGTCGGTG ATGGACAAGC CCGAGCTGCC GCCGAGCAAT
GACAAGCACG ACTACCTGAG CCAGGCTCCT TACTGGTGGC CGACGCAGCC GGCGACCGCG
GCCAACCCGT GGGGCTGCCC GTACGTGCAG CGCGACGGCG TCCGCAACCC GGCGATCGAC
GACATCACCG ACCACGCCGA GCGCGGCGAG ATGTTCAACG CCGTCTACGA CCTCACGCTG
GCCTGGTACT ACACCGGCGA TGCCGCCTAC GCGCAGCGCG CGGCGCTGGA CCTGCGCACC
TGGTTCGTCG ACCCGGCCAC GCGCATGAAC CCGAGCCTGG ACTTCACGCA GGGCATCCCC
TGCATGGTCA CCGGCCGGGG CATCGGCATC ATCGACTTCT CCCAGCAGTT CACCGACCTG
CTGGACGCGG TCGCGCTGCT GGACACCGGC GCGCCGGGCT GGTCCTCGGC GGACCGGGCC
GGGATGACCA CCTGGAACAA GCAGTTCCTC AGCTGGCTGC AGACCAGCAA GAACGCCTCG
GACGAGGCGG CGTCGACCAA CAACCACGGC TCGTTCTTCG ACATGCAGGA GGCCGCGCTC
GCGCTGGCGA CCGGGCAGCG CACGCTGGCC CGCTCCATCG TGACGACGGC GGAGACCCAG
CGGCTGAACG TGCAGATCGC GGCGGACGGC AGCCTGCCGC TGGAGCTGTC CCGGACGCGC
AGCTTCCACT ATTCGACGTT CGACCTGGTG GCGCTGACCC GGCTGGCGAT GATCGGCCAG
CATGTCGGGG TCGATCTGTG GCACTACAGC ACGCCGGGCG GCGGCACGTT GTTCAAGGCG
GTGGACTTCG TCGTGCCGGC GGCTACCGGA CAAGCCGCGT GGACGTATCC GGAACTCCAG
TTCCAAGCGT TCGCGGCGGT CGATGACATC CACGCCGCGG CCGACGCCGG GGACCGGACG
GCGCGCGCCG CTGTGGCGAA GCTGCCGACG CCGCCCGGCG GCGACCTGTG GTTGCTGCGT
CCGGCGCCCG AGCAGTTGGA TCCGATCAGC GGTTCCTGA
 
Protein sequence
MKRRTTPRII AALVLVAGVL TPSAVASAAT AAHQGPALRP LPVPATVVLD GYRLALTRDL 
VRVGLPSLNA PLAELRTQAD AALTAGPWSV MDKPELPPSN DKHDYLSQAP YWWPTQPATA
ANPWGCPYVQ RDGVRNPAID DITDHAERGE MFNAVYDLTL AWYYTGDAAY AQRAALDLRT
WFVDPATRMN PSLDFTQGIP CMVTGRGIGI IDFSQQFTDL LDAVALLDTG APGWSSADRA
GMTTWNKQFL SWLQTSKNAS DEAASTNNHG SFFDMQEAAL ALATGQRTLA RSIVTTAETQ
RLNVQIAADG SLPLELSRTR SFHYSTFDLV ALTRLAMIGQ HVGVDLWHYS TPGGGTLFKA
VDFVVPAATG QAAWTYPELQ FQAFAAVDDI HAAADAGDRT ARAAVAKLPT PPGGDLWLLR
PAPEQLDPIS GS