Gene Caci_5162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5162 
Symbol 
ID8336516 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp5930741 
End bp5931184 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content67% 
IMG OID644958260 
Producthypothetical protein 
Protein accessionYP_003115862 
Protein GI256394298 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.00674202 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCCGTCC GCTACCAGCT GGTGATCGAC TGCACCGACC CCGATCGCCA GGCGCGCTTC 
TGGGCTGCCG CGCTGGGCTA CGAACTCGCA CCGCCCCCGG CCGGTTTCGC GACGTGGAAC
GACTACTACC GCGACCTCGG GCTGCCGGAG GAGGATCTGA TCGACGGCGC GGACCGCATC
AGCGATCCGC TCGGCGGCGG TCCGGCGATC TGGTTCAACG TGGTGACCGA GCCGAAGGCG
GTGAAGAACC GGCTGCACAT CGACATCCAC GCCAGCGGCG AGCGGTCCGA CCCGCTCGAG
ATCCGCAAGC AGCGCGTGGA TGCCGAAGCC CGGCGCCTGG CGAGCCTCGG CGCGACCATC
ACCGTCGTCA TGTGCCAGGA AGGACTCGAC CATTACGCGG TCGGGATGAA GGACCCTGAG
GGCAACGAGT TCGATATCAA CTAG
 
Protein sequence
MSVRYQLVID CTDPDRQARF WAAALGYELA PPPAGFATWN DYYRDLGLPE EDLIDGADRI 
SDPLGGGPAI WFNVVTEPKA VKNRLHIDIH ASGERSDPLE IRKQRVDAEA RRLASLGATI
TVVMCQEGLD HYAVGMKDPE GNEFDIN