| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5128 |
|---|
| Symbol | |
|---|
| ID | 8336482 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 5887376 |
|---|
| End bp | 5888038 |
|---|
| Gene Length | 663 bp |
|---|
| Protein Length | 220 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644958226 |
|---|
| Product | isochorismatase hydrolase |
|---|
| Protein accession | YP_003115828 |
|---|
| Protein GI | 256394264 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1335] Amidases related to nicotinamidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGATCGTT TCAACGGCTT GGAAATCCCC GAATCCCTGA CCGAGGCGCT CGACCCCGCG
CGGTTGGCGC TGATCGTCTA CGACATGCAG GTCGGCGTGG TGCGGCAGAT CGCGGACGGC
GACGCGGTGC TCGGCAACGT GCGGCGGGTG CTGGCTGCGG CGCGGCAGTG CGGGGTGCGG
ACGATCTTCC TGCGGCACTA CTTCCTGCCG GCGTCGCTCG CGGGGGTCTT CCAGTTGCGG
CAGGCGAAGC TCTGGCAGCG CAAGGACGCC GCCGCCGACA CGCGGCCGCT GATCCCGTAC
GGCTCGCCCG GCTTCGAGCT GGTCGAGGGC TTGGATCCGG GCCCTGACGA GGCGGTCATC
GACAAGATCA CGATGTCGGC GTTCGAGGGC ACGCCGTTGG ACATCATCCT GCGCGACTGC
GGGGTGAGCA GCTACCTCAT CGTCGGTGTC GCGACGGAGG TCGGCATCGA GCCGACGGTG
CGGCACTCCG CGGACCTGGG CTACATCCCC ATCGTCGTGC GCGATGCCTG CGGCGCCGGG
AACCAGGACG CCGCCGCGCA CGCCCTCGCC GGGTTGGAAT TCGCCGGCGA CACGATCTTC
ACCGACACCG ACGAGGTCTG CCGCATTCTC GGCGCCAGGA CGCAGGATCA GGCTCGGTCA
TGA
|
|---|
| Protein sequence | MDRFNGLEIP ESLTEALDPA RLALIVYDMQ VGVVRQIADG DAVLGNVRRV LAAARQCGVR
TIFLRHYFLP ASLAGVFQLR QAKLWQRKDA AADTRPLIPY GSPGFELVEG LDPGPDEAVI
DKITMSAFEG TPLDIILRDC GVSSYLIVGV ATEVGIEPTV RHSADLGYIP IVVRDACGAG
NQDAAAHALA GLEFAGDTIF TDTDEVCRIL GARTQDQARS
|
|---|
| |