| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5109 |
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| Symbol | |
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| ID | 8336463 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 5867528 |
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| End bp | 5869339 |
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| Gene Length | 1812 bp |
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| Protein Length | 603 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644958207 |
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| Product | ABC transporter related |
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| Protein accession | YP_003115809 |
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| Protein GI | 256394245 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.575597 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.98251 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTTGTTCC GTCTGTTGGA GAATTCTGCT GACCCCTTCC GCCCCCACGG CCGGGGCACC
CCGCCGGCGA CGGCCCGCCG GTTCCTGACC GGCGAGTTCC GGCCGCTGCG GCTGATCGTC
GTCCTGGCGC TGGCCACCAC GGTCGCCGGC GCCGCGATCG AGGTCTGGCT GATCGGGTAC
GCCGGCCGCC TGGTCGACAT GCTCGCCGCG ACCAGCCGCG AGCGGTTCTG GGCCGAGCAC
GGCCGCGGGC TCGTCGTCGC GGCGGTCCTG ACCCTGCTTG TCAGGCCGCT GATCCACGTC
TTCAGCGAAG GCCTGGACGA CATCGCCTTC CGGGTCAACG CCCAGACGCT GGCCCGCTGG
CGGCTGCACC GGTACGTCTC GCGCCAGTCG GTGGGCTGGT TCCGCGACGA CCTCGCCGGC
CGCGTCGCCA CCTGGGTCCG CGACGGCGGT ACGGCCGCGG CCACCGCCTC CTACGCGGTC
ATCCACACGC TCGTCTCGGT GGCGGTCTAC ATCGCCGGGT CGGTGTGGCT CATCGCCTCG
ATCGACCCGC GGCTGGTGCT GCCGCTCGCG GCGTGGATCG TGCTGTACTC GGCGCTGCTG
GTGTGGCTCG TCCCGCGCTA CCGCGCGGCC CACGAACACA TGCAGGAGAC CGAATCCGAG
CTCACCGGTC TGCTCGTCGA CACCTATGCC AACGCCGACA CCCTCGCGCT GTTCCCGGAC
CGCGAGGCCG ACGACCGGCG GGTGTTCGCC GCCGCCCGGC GCGCGTATCT GAGCGTGCAG
CGCGTCGAGG TGACGATCAA CGCGAGCATG ACGACGCTGG GCGGCGCGCT GCTCGTCGGC
CTGATCGGTT ACGGCATCGT GCTCTGGCGC GCCGGCGCGG CGCCGATCGG CCTGGTGGCG
GCGGCCTCGG CGCTCAGCTT CCGTATCACG TCGATGGGGG AGTGGCTGCT CGACGCACTC
TCGGACATGT TCGGCGCGCT CGGCCAGCTG GACCGCTCGT TGCGCACCGT CGCGCAGCCG
CTGGCCGTCG AGGATTCGCC GAAGGCTGTC ATCCTCCCGC CGGCCAAGGG TCGGATCCGC
TTCGAAGGTG TCAGCCACCA TTACGGACGC GGCGCGGGCG GCCTGGACCG GCTCAGCCTC
GACGTCGCAG CCGGCGAGCG CGTCGGCTTG GTCGGCCGTT CCGGCGCGGG CAAGTCGACG
GTGGTCAGCC TGCTGCTGCG CTTCTACGAG GCCGAGTCCG GCACGATCTC GATCGATGAC
CACCGCGTCG CCGACGTCAC CCAGGACAGC CTGCGGCGGC AGGTCGCGGT GGTGGCGCAG
GAGGCGACGC TGCTGCACCG CTCCGTCCGC GACAACATCG CCGGCGGCAT CGCCACCGAC
GACGAAGCGG TCCGCGCGTC CGCCCGCCGC GCCGCCGCCG ACGGATTCAT CGCCGCGCTG
CGCGACGCGC AAGGGCGTCA GGGCTATGAC GCGCTTGTCG GCGAACGCGG CATCCGGCTC
TCCGGCGGGC AGCGCCAGCG CATCGCCCTG GCCCGGGCGC TGCACCGCGA CGCGCCGATC
CTGATCCTGG ACGAGGCCAC CTCAGCGCTC GACTCCGAGG TCGAGGCCGC CATCCAGGAG
ACGCTGGAGG AGGTGATGGA GGGCCGGACG GTGATCGCGA TCGCGCACCG GCTCTCCACG
ATCGCGCGCA TGGACCGGAT CGTGGTGCTC GACGAGGGAC GAATCGCCGA ACAGGGCACG
CACGAATCGC TGCTGGCGCT CGGCGGGCTG TATGCCGCGT TGTGGTCGCG GCAGTCCGGC
GGCTTCCTGT GA
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| Protein sequence | MLFRLLENSA DPFRPHGRGT PPATARRFLT GEFRPLRLIV VLALATTVAG AAIEVWLIGY
AGRLVDMLAA TSRERFWAEH GRGLVVAAVL TLLVRPLIHV FSEGLDDIAF RVNAQTLARW
RLHRYVSRQS VGWFRDDLAG RVATWVRDGG TAAATASYAV IHTLVSVAVY IAGSVWLIAS
IDPRLVLPLA AWIVLYSALL VWLVPRYRAA HEHMQETESE LTGLLVDTYA NADTLALFPD
READDRRVFA AARRAYLSVQ RVEVTINASM TTLGGALLVG LIGYGIVLWR AGAAPIGLVA
AASALSFRIT SMGEWLLDAL SDMFGALGQL DRSLRTVAQP LAVEDSPKAV ILPPAKGRIR
FEGVSHHYGR GAGGLDRLSL DVAAGERVGL VGRSGAGKST VVSLLLRFYE AESGTISIDD
HRVADVTQDS LRRQVAVVAQ EATLLHRSVR DNIAGGIATD DEAVRASARR AAADGFIAAL
RDAQGRQGYD ALVGERGIRL SGGQRQRIAL ARALHRDAPI LILDEATSAL DSEVEAAIQE
TLEEVMEGRT VIAIAHRLST IARMDRIVVL DEGRIAEQGT HESLLALGGL YAALWSRQSG
GFL
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