Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_5085 |
Symbol | |
ID | 8336439 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 5842817 |
End bp | 5843758 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644958184 |
Product | polyhydroxybutyrate depolymerase |
Protein accession | YP_003115786 |
Protein GI | 256394222 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3509] Poly(3-hydroxybutyrate) depolymerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0474117 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.355318 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAAGAA GCGCCTTCAC CGCCGCTGTC GCCGCGATGT GGCTGGTCCT GGCGACGGCA CTGGCCGGTT GCCAGAGCCG CACGCACGCC TCCCCGGTCC CGTCCTCCGC GCCGGTCGGA GGGTCCGCGC AGTCCATCAA GATCGGCGGC GCCACCCGGA CGTTCCACCT CTACCGTCCG CACAATCTGC CGGCGCGCGC GCCCCTGGTC GTCATGCTCC ACGGCGGCTT CGGCACCGGC ACCCAGGCCG AGCAAGACTA CGGATGGGAC CAGGAGGCCG ACCGCGACGG CTTCGTCGTG GTCTACCCCG ACGGCGTGGA CCACGCCTGG AACACCGGCG GCGGCTGCTG CGGCAACCCG GCGGAGCAGA ACACCGACGA CGTCGGCTTC ATCAAGGCCA TGATCGGCGC CATCCAGGGC GAAGTCCCGA TCGATCCCTC CCGCGTCTAC GCCACCGGCA TCTCCAACGG CGGCATCATG GCCTACCGCC TGGCCTGCGA CACCAACCTG TTCGCCGCCA TCGGCCCAGA CTCCGCAACC CTGCTCGGTA CCTGCCCCGC ACCGAAACCG CTGTCAGTCC TGCACATCCA CGGCAGCGCA GACACCCGCA TCCCCTACAA CGGCGGCGAA GGCGAGGGCT ACGCGCACAT CAACGGCCCA CCGGTCCCCT CCGTCGTGTC CACCTGGCGC ACCATCGATT CCTGCACCCC ACCAACGACC CAGACCAAAG ACAAGGTCAC CACCTCCACC GCCACCTGCC CCGACGCCCG AACCGTCGAA CTGATCACCA TCACCGGCGC AGGCCACCAA TGGCCCGGCA GCCCCCAGCG CCCGGTGAAG AAGGCTCTCC TGGGCTCGGA CACCCCCTCC ACGGCACTGA ACGCGACGGA CGTCTTCTGG CAGTTCTTTG CGGCGCATCC CAAAAGCGAC GCCTCTGGCT GA
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Protein sequence | MRRSAFTAAV AAMWLVLATA LAGCQSRTHA SPVPSSAPVG GSAQSIKIGG ATRTFHLYRP HNLPARAPLV VMLHGGFGTG TQAEQDYGWD QEADRDGFVV VYPDGVDHAW NTGGGCCGNP AEQNTDDVGF IKAMIGAIQG EVPIDPSRVY ATGISNGGIM AYRLACDTNL FAAIGPDSAT LLGTCPAPKP LSVLHIHGSA DTRIPYNGGE GEGYAHINGP PVPSVVSTWR TIDSCTPPTT QTKDKVTTST ATCPDARTVE LITITGAGHQ WPGSPQRPVK KALLGSDTPS TALNATDVFW QFFAAHPKSD ASG
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