| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5084 |
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| Symbol | |
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| ID | 8336438 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 5841264 |
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| End bp | 5842784 |
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| Gene Length | 1521 bp |
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| Protein Length | 506 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644958183 |
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| Product | hypothetical protein |
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| Protein accession | YP_003115785 |
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| Protein GI | 256394221 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3463] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.108071 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.201189 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGAAG ATCTCGCGGA GCGCCCGGCC GCTCGCCGCT CTCCGCATGG CTATGTGCTC
GCCGCGATGG TCGTTCTGGT CGCCGTGGCG TATGCGGTCT ATGAGCTGAC CGTCTACCGC
ACGTATCGGT CGTCCACCTA CGACTTGGTG ATATTCGATC AGGCGGTGCG CTCCTACAGC
CACTTCCATC TGCCGGTGGC GATCGTCAAG GGTGTGCACA ACAACTTCGG CGCGCAGTTC
ACCGTGCTCG GCGACCACTT CTCGCCGATC ATCGCCGTGC TCGCGCCGCT GTATTGGATT
TCCGGCAATC CGAAGACGCT GCTGGTCGCG CAGTCCGTGT TGCTGGCAGG CGCCATTCCG
TGGCTATGGG TCTACGCGCG CCGGGCTTCG GGGACGTTCG CAGCGTACTG CGTCGTCGTG
ATCTACGCGG TGTCGTGGCC GGTGGCTGCG GCGGTCGCCT TCGACTTCCA CGAGACCGCC
TTCGTGCCGC TGCTCAGCGC GGTGCTGCTG GAGCGGTATC AGGCCGGGCG GCGCGTGCAC
GCGGTGCTCG CCGCGTGCCT CCTGCTGCTG GTCAAGGAGG ACATCGGGCT GCTCGTCGCC
GGGTTCGGCC TCTTCTTGGT GACCGGTTGC CGGCTCCCGG CGCAGGAGAA GTACGCCCGC
CAGCGTCTGC TCGGCGCCGC GTTCGTGGTC GGCGGGGTCG GCTGGACGCT CGTGGCGACG
CACGTCTTCA TCCCCGCGTT CGGCGGACGC GGAAACTACT ACTGGGCCTA CACCGCGCTG
GGCCCGGACC TGCCGAGCGC CACGACGCAC GCGATCGCGC ACCCGGTCTC GACGCTCCAG
CTGTTCGGGA CGCCGTCCAT CAAGATCACA ACGATGACCT GGCTCGTCGT GCCGCTGCTG
CTCCTCCCCC TGGCCTCGCC GCTGACCCTG ATGGTCATTC CGGCACTGGC CGCCCGCATG
GGGTCGAACC TGTTCCCCAA CTGGTGGGGC GAGGAGTATC AGTACAATGC GGAGCTGATC
GTTCCGCTGG TGGCGGCAGG CCTGGACGGC GCACTGCGTA TCAACATGCT CCTCACGCGG
CTGCGCCCCA TCTGGACCTG GACCAAGCGC ATCGGTCCAG CATGGGCAGC CGGAGCCCTC
ATGGTGTCGG TCGCAGTCAT CCCGAAGTTC GCCTTCGACG CCTACGGCCA GTCATCCTTC
TACCGGCTGA CCCCTGCGGA CCGCGCCGCC GCGACAGCCG CCGGCCACGT CCCCGACGGA
GTGGTCGTCG AGGCGGCGAG CCTGATCGGC CCGCACCTGA GCGCGCGCGA CACGGTGCTG
CTGCTGGACA AGACCCCACG CTGGGCACCC TGGGTCGTCG CGCAAATCTC CGATCCGACG
TTCCCGATCT CGGACGCCGC CGCCCAGAAG GCGCGCGTCA CATATCTGGA GACGAACGGC
TATCGCCCCG TGTGGCACGA CGACTTCTAC GTCGTGCTGA CCAAGCCGGG ATCCGTGCCG
GACTACACCA GGCACGGGTA G
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| Protein sequence | MPEDLAERPA ARRSPHGYVL AAMVVLVAVA YAVYELTVYR TYRSSTYDLV IFDQAVRSYS
HFHLPVAIVK GVHNNFGAQF TVLGDHFSPI IAVLAPLYWI SGNPKTLLVA QSVLLAGAIP
WLWVYARRAS GTFAAYCVVV IYAVSWPVAA AVAFDFHETA FVPLLSAVLL ERYQAGRRVH
AVLAACLLLL VKEDIGLLVA GFGLFLVTGC RLPAQEKYAR QRLLGAAFVV GGVGWTLVAT
HVFIPAFGGR GNYYWAYTAL GPDLPSATTH AIAHPVSTLQ LFGTPSIKIT TMTWLVVPLL
LLPLASPLTL MVIPALAARM GSNLFPNWWG EEYQYNAELI VPLVAAGLDG ALRINMLLTR
LRPIWTWTKR IGPAWAAGAL MVSVAVIPKF AFDAYGQSSF YRLTPADRAA ATAAGHVPDG
VVVEAASLIG PHLSARDTVL LLDKTPRWAP WVVAQISDPT FPISDAAAQK ARVTYLETNG
YRPVWHDDFY VVLTKPGSVP DYTRHG
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