Gene Caci_5062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5062 
Symbol 
ID8336416 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp5809404 
End bp5809814 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content72% 
IMG OID644958161 
ProductCupin 2 conserved barrel domain protein 
Protein accessionYP_003115763 
Protein GI256394199 
COG category[S] Function unknown 
COG ID[COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTCTG AGAACACACA CCTGCCCCCG GGCGTCGAAG TGATCGCCAC CCTGCCGGGG 
GCGGCGGCGC GGATCGCGGC CGACGCCGAG GCCAGGACCG TCCGGGTCAC GCTGGCACCG
GGCGATCCCG GCGCGCCGCC GCACCGGCAC CCCGGTCCGG TCTTCGGCTA CGTGACCCAG
GGCGAGATCC TCTTCGAGCT GGAGGGCGAG GAGCCGCGCG TGCTCAGGGC CGGCGAAGCC
GTGTTCGAGC CCGGCGGCGA CGTCATCCAC TACCTGGGCG CGAACAACCT CGCCGACACG
CAGTCGGAGC TGGTGGTGAC CCTGTTCGCG CCTCCCGGCA CGCCGATCCT GACCGTGGTC
GGCGCGGAGG AACTGGCCGA ACGGCGTCAT CTGAGGTTCA GCCAGTCCTG A
 
Protein sequence
MSSENTHLPP GVEVIATLPG AAARIAADAE ARTVRVTLAP GDPGAPPHRH PGPVFGYVTQ 
GEILFELEGE EPRVLRAGEA VFEPGGDVIH YLGANNLADT QSELVVTLFA PPGTPILTVV
GAEELAERRH LRFSQS