| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5057 |
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| Symbol | |
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| ID | 8336411 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 5804900 |
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| End bp | 5805616 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644958156 |
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| Product | Small-conductance mechanosensitive channel-like protein |
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| Protein accession | YP_003115758 |
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| Protein GI | 256394194 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.755901 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGACA GGAGCGTGAG TACAGGGGCG GGTACGGAGC GCGAGCCGCT CCTCATCCCC
GCATCCCACG CCGAAGTGCC AGATCTGCGC ACCCGAGCGG GGCGAAACCT GCGGCAGGTC
ATCCTGCGGC GTGGCGCCTT CGCCTCGGCG ATCGCCGTCG TGGCGCTGGT CGTCTCCTAC
CACTACGGCG GCCTCGTCGG CGCCGGCGGG CATCAGTCCC TGCACCTGGT GCTGGCGTTC
GCCGGCGCGG TGGTGTTCCT GGTGAGCGCG GTGATCGCGG TGCGCTGCGC GACCAACGAC
ATCCTGGGAC TGGTGCACGT GCCGGGGCGG CTCAGCGACG CGCGAGCGAG CACGCTGCGC
ATCCTGTGCC TGCTGTTCGG TTACATCCTG GTGGTCTTCG GCGCGTTGAG TCTGTTGCGC
GTGCCGGTGG GGCATCTGCT GCTCGGCGGG GTCCTGACCG GGGTCATCCT CGGTATCGCG
GCGCAGCAGG TCCTCGCGAA CGTCTTCGCG GGCATCACGA TCTTGTTCGC CAAGCCGTTC
ACGATCGGTG ACGAGCTGCG CATCCGCTCC GGTGCCCTCG GCGGGCCCAT CGTCGGCCGC
GTGTCCGGTA TGACGCTGAC GTACGTGACG GTGCGGACCG CCGCCGGACC AGTGCTGGTT
CCCAACAGCG CGGTGCTCGC GGCGGCCGTC GGACCTGCGC AGGAGTGGCT GGAGTAG
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| Protein sequence | MQDRSVSTGA GTEREPLLIP ASHAEVPDLR TRAGRNLRQV ILRRGAFASA IAVVALVVSY
HYGGLVGAGG HQSLHLVLAF AGAVVFLVSA VIAVRCATND ILGLVHVPGR LSDARASTLR
ILCLLFGYIL VVFGALSLLR VPVGHLLLGG VLTGVILGIA AQQVLANVFA GITILFAKPF
TIGDELRIRS GALGGPIVGR VSGMTLTYVT VRTAAGPVLV PNSAVLAAAV GPAQEWLE
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