| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5042 |
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| Symbol | |
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| ID | 8336396 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 5783413 |
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| End bp | 5787378 |
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| Gene Length | 3966 bp |
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| Protein Length | 1321 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644958141 |
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| Product | glycoside hydrolase family 3 domain protein |
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| Protein accession | YP_003115743 |
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| Protein GI | 256394179 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1472] Beta-glucosidase-related glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCGCACCC TGCTGGCGGC GGGGGCGTTG TTCGCCGCCT CGCTGGCGGG GTTGCCGAGT
CCGGCGAACG CCGCTGCCAG CGCGCCGTTC GGCGGGACGG CCGCGGCTGT CCCGGGTCTG
ATCCAGGCTG CGAACTACGA CACCGGCGGC CAGGGCGTCG CCTACAACAC GGTCGCGGGC
AACGGCTCTG CCAACAGCTA CCGGGCTGAC GGCATCGATC TGGAGACCAC CGCCGACACC
TCGGGCACCA CCCCGGCCGG TGGCGCGTAC GACATCGGCT GGACGAACGC CGGACAGTGG
TTCAACTACA CGGTCAACGT CGCGACGGCT GGCACGTACA GCGTGGCCTT CCGACTGTCT
TCGCCTTACG GCCTCACCGA TGCGCTGCAC ATCGCCAACG CCTCCGGTAC CAACCTGACT
GGTTCGGTCG CGGTGCCCAA CACCGGTGGT TATGAGACCT GGACAACGGT CACGGCGAGC
CTGGTGCTGC CTGCCGGTAC CCAGACGCTG ACGGTGAAGC AGGACTCGAA CGGCTGGAAC
TTCCACAACA TGGCCTTCAC CCTCACCTCG AGTGGTGGCG GCGGTGGAGG CGGCACTGAC
AAGCCGTTCG GCGGGACGCC GGCGCCGGTT CCCGGCACGG TTCAGATCGC CAACTACGAC
ACCGGCGGAG CAGGCGTCGC CTACAACGTG ACCGGCACCA ACGGCTCGGC GAACGGCTAC
CGCACCGACG GCGTCAACCT GGAGAACACC GCGGACACCC AGGACACCAC TCCTCCCGGC
GGCGCCTACG ACATGGGCTG GACCAACGCC GGACAGTGGT TCCATTACAC GGTCCAGGTC
GCGACCAGCG GCATCTACAC GGTCAGCTTC CGAGTCGCAG CGCCGGCGGC CATCGCCGAC
GCGCTGCACG TCGCCGACTC CACCGGCGCC AACCTGAGCG GCGCGGTCGC CGTTCCGGCC
ACCGGCGGGT ATCAGACCTG GTCCACGGTC ACCGCGAGCG TCACGCTCGC GGCCGGCGCG
CAGACGCTCA CCGTCGCCCA GGACGCGGCG GGCTGGAACA TGCACTTCCT GTCCTTCGCT
CAGGGCTCGA GCGGCGGCGG CGGAGGAGGT GGAGGCGGCG GTGGCGGCGG CAAGTACTGC
GGCTACCAGG ACCTCGCCCT GGCCCAGCCG ACCACGGCTT CCTCAACGTA CTCCGCCACC
GGCAACCTGG CTCCCGCGGC CACCGACGGC AACCCCGGCA GCCGCTGGGA GAGCGCGTAC
AGCGACCCGC AGTGGCTCGA GGTCGACCTC GGCGCCCAGA CCTCGATCTG CGCCGCCGCA
CTGTCCTGGG AGGCCGCGTA CGCCTCGGCG TTCCAGATCC AGACCTCGAC CGACAACGCG
ACCTGGAACA CGGTCTACTC CACCACGACC GCCACCGGCG GCAGCGAGTC GTTCACGTTC
TCGGCGACCG CCCGCTACAT CCGGGTGAAC GCCACGAAGC GCGCGACCCA GTGGGGCGAC
TCGATCCTCG AGTTCGACGT CTACGGTCTG ACCGACGTGC CCCCGCTGTC AGGCGGCAAC
GGCACCGGCG GCAACGGCGT GTGCCCGTGG GTGAACTCCA CCGCCTCGGT CGCCTCGCGA
GTGCAGCAGG TCCTCAATAC CATGAACCAG TCCGAGGAGT TCACGCTGCT CTCCGGCGAC
GGCGGCTCCT CCTACATCGG CCAGGTCGCC GGCATCCCCA ACCTCTGCAT CAAGCCGATG
AACATGCAGG ACGGCCCGAC CGGCGTCGGC GACGGGACCG GCGGCGTCAC CGCCTACCCC
GACGGCGAAT CCGCGGCGGC CACCTGGGAC CCGGCGCTGA TCCAGCAGGA GGGCACCGCG
ATGGGTGCCG AGTTCGCGGG CAAGGGCGTG AACGTCTCGC TCGGCCCGAC AACGAACCTG
GTGCGCGACC CGCGCTGGGG ACGGACCTAT GAGACCTACG GCGAGGACCC GTTCCTGGCC
GGACAGATCA CCTCCTCGCA GGTGAAGGGT CTGCAGAGCC AGGGCGTCCA GGCGATGGTC
AAGCACGTCG CGGCCTACGA CCAGGAGACG TACCCGAACG GCGGCAACAA CGAGACGGTC
AGCAACCAGG CGCTGCAGGA GCTGTACCTG GCTCCGTTCG AGTCCACCAT CGCGCAGTCC
GCGCCGGCGT CGTTCATGTG CTCCTACGCG GTCGTCAACG GCAACGCCTC GTGTCAGAAC
TCGTACATGC AGATCAAGGG CCTGGACGAC GCCGCGAACT TCGGCGGCTA CATCACCTCC
GACTGGGGCG GGGACTACAA CAACGTCGCC TCGGTGGTGG GCGGCATGGA CATCGGGATG
CCGTTCCCCG GCTCGATCCC GACCGACCTG GCCAACGCCG TCAGCAACGG CACGCTGAGC
CAGTACGGGG TGAACGCGGC CGTCAGCAGG ATCCTGACCC AGATGTTCGC CTTCGGCCTG
TTCGACAACC CGGCCAGCGG CTCGTTGGCG AACACCGTCA CCTCCGCGGC GCACCAGCAG
ACCGCGCTGC AGCTCGGTGA AGAGGGCACG GTCCTGCTGA AGAACAACGG CCTGCTCCCG
CTGAACCCGA ACCCGACCAC CGCGAAGTCC ATCGCCGTGA TCGGCACCGA CGGCGGCGCC
GGCGTCGAGA TCGCCGGCGG CGGCAGCGGA ACCGTCACGA GCGCGAACAC GATCTGGCCG
ATCACCGGCA TCCAGAACGC GGTCGGGCCC AACATGAAGG TCACCTACAC CCAGGGCAAC
GACAACGGCA CGGCGAACAT CCCGCAGGCC GTCGCGGCGG CGAAGGCAGC CACCTACGCG
GTCATCTACG TCAACGCGCC CGAGGGCGAG GAAAGCGACC TGCAGACCCT CAACCTCTCC
GCGACCGACG AGACGATGAT CAACAATGTG GCCGCGGCGA ACCCGAACAC CATCGTGGTG
ATCAACAGCG GCTCGCCGGT GGTCATGCCG TGGCTGAACA ACGTGGCCGG CGTGTTCGAG
AACTGGTACG GCGGCGGCGA GACCGGCGCG GCGGTGGCCG CGCTGATCTT CGGCACGGCG
AACCCGTCCG GCAAGCTGCC GGTGACGTTC CCGGCGTCGC TGAGCCAGGT CCCGGCGCAG
ACCACCGCGC AGTGGCCGGG CACCCCGACC GGGCCGATCT ACAGCGAGGG CGTGAAGATC
GGGTACCGCT GGTACCAGTC GCAGAACATC ACCCCGGCGT TCCCCTTCGG ATACGGCCTG
TCCTACACCA AGTTCTCCTT CTCCAACTTG GCAGTCGGCG GGTTCAACTC CAACGGCCAG
GCAACTGTGA CCGCAACGGT GACCAACACC GGATCGGTCG CCGGTGCCGA GGTGGCGCAG
ATGTACGTCG GCGACCCGGC AGCCAGCCAA GACCCGCCCA ACCAGCTGGC CGGATTCCAG
CGCGTCATGC TCAACCCGGG GCAGAGCGCA CAGGTTTCCT TCCCGCTGAC CATCCACAAC
CTGGCAGCCT GGTCGCCCAC CGACAACCAG TGGGAGGCAC AAGCCGGTAG CTACGCGATC
CGCGTCGGTG ACGCCTCCAA CAACCTGCCG CTGACCGGGT CGACGTCACT GGCCAACACG
CTCACCGGTC AGGTCGCCGC AGGCTCCTCC TACGCGGGGA TATCGACCGC GAACACTGCG
GTCAGCGCCA ACGTCACACC GAATTCCGGT GTGCCCGGCT CGGAAACCGT CGGCGTGGCC
AACCCGTTCG GGTACAGCAG CCCGAAGGGC ACCGGCGTCT CCTTCCAGAT GCAGGGTGTC
GACTCCAACG CCTCGCAGAC ACTCACCTAC ACCGCCAGCG GACTGCCGCC AGGCATCAGC
ATCAGCGGCA ACGGCACCTT CTCCGGATCG GGCAACACGC TCGGGACCTA CACCGTGACC
GTCACCGCCA AGGACGGAGC GGGGGTGACC GGCACGGCCA CCTTCGTGTG GTCCATCGTT
CAGTGA
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| Protein sequence | MRTLLAAGAL FAASLAGLPS PANAAASAPF GGTAAAVPGL IQAANYDTGG QGVAYNTVAG
NGSANSYRAD GIDLETTADT SGTTPAGGAY DIGWTNAGQW FNYTVNVATA GTYSVAFRLS
SPYGLTDALH IANASGTNLT GSVAVPNTGG YETWTTVTAS LVLPAGTQTL TVKQDSNGWN
FHNMAFTLTS SGGGGGGGTD KPFGGTPAPV PGTVQIANYD TGGAGVAYNV TGTNGSANGY
RTDGVNLENT ADTQDTTPPG GAYDMGWTNA GQWFHYTVQV ATSGIYTVSF RVAAPAAIAD
ALHVADSTGA NLSGAVAVPA TGGYQTWSTV TASVTLAAGA QTLTVAQDAA GWNMHFLSFA
QGSSGGGGGG GGGGGGGKYC GYQDLALAQP TTASSTYSAT GNLAPAATDG NPGSRWESAY
SDPQWLEVDL GAQTSICAAA LSWEAAYASA FQIQTSTDNA TWNTVYSTTT ATGGSESFTF
SATARYIRVN ATKRATQWGD SILEFDVYGL TDVPPLSGGN GTGGNGVCPW VNSTASVASR
VQQVLNTMNQ SEEFTLLSGD GGSSYIGQVA GIPNLCIKPM NMQDGPTGVG DGTGGVTAYP
DGESAAATWD PALIQQEGTA MGAEFAGKGV NVSLGPTTNL VRDPRWGRTY ETYGEDPFLA
GQITSSQVKG LQSQGVQAMV KHVAAYDQET YPNGGNNETV SNQALQELYL APFESTIAQS
APASFMCSYA VVNGNASCQN SYMQIKGLDD AANFGGYITS DWGGDYNNVA SVVGGMDIGM
PFPGSIPTDL ANAVSNGTLS QYGVNAAVSR ILTQMFAFGL FDNPASGSLA NTVTSAAHQQ
TALQLGEEGT VLLKNNGLLP LNPNPTTAKS IAVIGTDGGA GVEIAGGGSG TVTSANTIWP
ITGIQNAVGP NMKVTYTQGN DNGTANIPQA VAAAKAATYA VIYVNAPEGE ESDLQTLNLS
ATDETMINNV AAANPNTIVV INSGSPVVMP WLNNVAGVFE NWYGGGETGA AVAALIFGTA
NPSGKLPVTF PASLSQVPAQ TTAQWPGTPT GPIYSEGVKI GYRWYQSQNI TPAFPFGYGL
SYTKFSFSNL AVGGFNSNGQ ATVTATVTNT GSVAGAEVAQ MYVGDPAASQ DPPNQLAGFQ
RVMLNPGQSA QVSFPLTIHN LAAWSPTDNQ WEAQAGSYAI RVGDASNNLP LTGSTSLANT
LTGQVAAGSS YAGISTANTA VSANVTPNSG VPGSETVGVA NPFGYSSPKG TGVSFQMQGV
DSNASQTLTY TASGLPPGIS ISGNGTFSGS GNTLGTYTVT VTAKDGAGVT GTATFVWSIV
Q
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