Gene Caci_5003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5003 
Symbol 
ID8336357 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp5727698 
End bp5728132 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content71% 
IMG OID644958102 
ProductCupin 2 conserved barrel domain protein 
Protein accessionYP_003115704 
Protein GI256394140 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.190773 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.813691 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACAGGA TCCGCCGCGG ACTCGCGCTC GCCAGCACGG TCGTCGCCGG TGTCGCCCTC 
ACGCCGGGCG TCGCGAACGC CACGCCGTCA TCAGGCGTGT CGGGCACGAT CATCAGCCAG
GTCACCGTCG GCGGCGAGGA CTACATCCTG CGGCAGATCA CCATCCAGCC CGGCGGCACC
ACCGGCTGGC ACTGGCACGA CGGCACGCTG TACGCGTACG TCGAGCGCGG CACGCTCACG
CACACCGACG CGGACTGCAC GACCACCGAC GTCTACCGCC GGGGCGCGGT GTTCATCGAG
CCGAGCGGCG CCGACCACGT GCACGTCGGG CGGAACCTGG GCACGGCGCC CCTCGTGCTG
GATGTCCTCT ATGTGGATCC TGCCGGCTCC CCGTTGTCAG AGGACGCACC GAACCCGGGG
TGCAGCTTCC AGTAG
 
Protein sequence
MHRIRRGLAL ASTVVAGVAL TPGVANATPS SGVSGTIISQ VTVGGEDYIL RQITIQPGGT 
TGWHWHDGTL YAYVERGTLT HTDADCTTTD VYRRGAVFIE PSGADHVHVG RNLGTAPLVL
DVLYVDPAGS PLSEDAPNPG CSFQ