Gene Caci_4994 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4994 
Symbol 
ID8336348 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp5714231 
End bp5714905 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content75% 
IMG OID644958093 
Producttranscriptional regulator, IclR family 
Protein accessionYP_003115695 
Protein GI256394131 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0276676 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0169874 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGCGA TCGTGACGAG GGCTGTTCCC GCCGTGGCGC GGGCGCTGGA CATCCTGGAG 
CTGTTCCTGG GGCGTCCCAC GCTGACCGCC GCCGAGATCG CCGCGGGCAC CGGCCTGCCG
CGCAGCACGG TGCACGAGCT GATGGGCACC CTCATCGAGC GCGGTTACGC CGCCACCGAC
CCCGGCTCCC CGACCCGCTT CCGTCTCGGG CCGCAGGTGC TGCTGCTCGG CAGCCGCTTC
GCCGACCGTC TGGACCTGGC GCGCGAGGCG CAGAGCGTGG CCGAGGCGGT CGCCGCCGAG
TGCGGCGAGA CGGTGCAGGT CGCGGTCCTC GACGGTGGAT TCGCGGTCTG CGTCGCCAAA
GCCGACTCCA CGCACGCGGT CCGTGTGGTC GCCGCGGTCG GCTCGCGCCT GCCGGTGCGG
GCCTCGGCGC TGGGCCAGGC GCTGCTGGCC GGGCTCGGCA CGGACACCGC GGCGGTCGAG
GAGGTCGTGT TCGAGCACGA CGAAGCCGGC AACGACGTGC GCTCGGTCGC CGCGCCGGTC
CGCGACCACA ACGGCCGGGT GGTGGCCGCG CTCGGGGTGA CGGTGCCGGC GACGCGGCCG
GTGGAACTGT GGTCGCCGCA GGTACGCAAG GGAGCGGCGG AGCTGTCCGA ACGACTGGGG
CATCAGCGGT CCTGA
 
Protein sequence
MLAIVTRAVP AVARALDILE LFLGRPTLTA AEIAAGTGLP RSTVHELMGT LIERGYAATD 
PGSPTRFRLG PQVLLLGSRF ADRLDLAREA QSVAEAVAAE CGETVQVAVL DGGFAVCVAK
ADSTHAVRVV AAVGSRLPVR ASALGQALLA GLGTDTAAVE EVVFEHDEAG NDVRSVAAPV
RDHNGRVVAA LGVTVPATRP VELWSPQVRK GAAELSERLG HQRS