Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_4994 |
Symbol | |
ID | 8336348 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 5714231 |
End bp | 5714905 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 644958093 |
Product | transcriptional regulator, IclR family |
Protein accession | YP_003115695 |
Protein GI | 256394131 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0276676 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.0169874 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCGCGA TCGTGACGAG GGCTGTTCCC GCCGTGGCGC GGGCGCTGGA CATCCTGGAG CTGTTCCTGG GGCGTCCCAC GCTGACCGCC GCCGAGATCG CCGCGGGCAC CGGCCTGCCG CGCAGCACGG TGCACGAGCT GATGGGCACC CTCATCGAGC GCGGTTACGC CGCCACCGAC CCCGGCTCCC CGACCCGCTT CCGTCTCGGG CCGCAGGTGC TGCTGCTCGG CAGCCGCTTC GCCGACCGTC TGGACCTGGC GCGCGAGGCG CAGAGCGTGG CCGAGGCGGT CGCCGCCGAG TGCGGCGAGA CGGTGCAGGT CGCGGTCCTC GACGGTGGAT TCGCGGTCTG CGTCGCCAAA GCCGACTCCA CGCACGCGGT CCGTGTGGTC GCCGCGGTCG GCTCGCGCCT GCCGGTGCGG GCCTCGGCGC TGGGCCAGGC GCTGCTGGCC GGGCTCGGCA CGGACACCGC GGCGGTCGAG GAGGTCGTGT TCGAGCACGA CGAAGCCGGC AACGACGTGC GCTCGGTCGC CGCGCCGGTC CGCGACCACA ACGGCCGGGT GGTGGCCGCG CTCGGGGTGA CGGTGCCGGC GACGCGGCCG GTGGAACTGT GGTCGCCGCA GGTACGCAAG GGAGCGGCGG AGCTGTCCGA ACGACTGGGG CATCAGCGGT CCTGA
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Protein sequence | MLAIVTRAVP AVARALDILE LFLGRPTLTA AEIAAGTGLP RSTVHELMGT LIERGYAATD PGSPTRFRLG PQVLLLGSRF ADRLDLAREA QSVAEAVAAE CGETVQVAVL DGGFAVCVAK ADSTHAVRVV AAVGSRLPVR ASALGQALLA GLGTDTAAVE EVVFEHDEAG NDVRSVAAPV RDHNGRVVAA LGVTVPATRP VELWSPQVRK GAAELSERLG HQRS
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