| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4974 |
|---|
| Symbol | |
|---|
| ID | 8336328 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 5688105 |
|---|
| End bp | 5689193 |
|---|
| Gene Length | 1089 bp |
|---|
| Protein Length | 362 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 644958073 |
|---|
| Product | HTTM domain protein |
|---|
| Protein accession | YP_003115675 |
|---|
| Protein GI | 256394111 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0106846 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.33114 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGTCTG ATCAGGCAAT CCGTTCCGAC ACCGGCGTCG CCGCCAATGT CGTCCCCACC
AGCATCGTCC CGGCAGCCGG CACCGTGCGC CGCCCCGACC CGGTCGCCAG GGCGTACACC
TTCCTGACCG AACACGCGGT CTCGCTGCAG GCGGCGAGTC TGCTCCGCAT CGGATACGGT
CTGCTCTACC TCGTGTTTCT GCTGCGGGAG TTCCCGCACC GGGACGAGAT CTGGGGTCCG
GGCTCGCCTT GGACACCGGC TCTGGCACGC GAGCTGTTCG GGCAGACCGG GTGGTTCAGC
ATCCTGACTC TCTCCGACAA TCCGTGGTAC TTCGAGCTCT GCTATGGCTT CGCCCTCGTC
ACGGCTGCCC TGTTCATGCT CGGCTGGCAT ACGAGGGTGC TCTCGCTTCT GTTCGCCCTC
GTGGTGCTTT CCTTCCACGC CCGCTCTATC TACATGGCGG ACGGCGGCGA CAATCTCACT
GTCCTGATGT CCCTCTACCT CGTGCTCACG GACTGCGGCC GTTGCCGGTC TCTCGATGCC
CGGCGTCGAC GTCGCGCATC CTCGCGCGTG GCGGGGTGGC CCGATGCACC GCACCAAAGC
CCTTCTTCTG CACGGCAGCA GGCCGACCTG GCGCGGCGGA TGCTCAGCAC CCTGCTGCAC
AACTGCGGCA TGTTCGTCAT CGCCGCCCAG GTGTGCATCC TCTACGGCGC GGCAGGCCTG
TACAAGGTGC AGGGTGATCT ATGGCGCGAC GGCACCGCGT TGCACTACGT GCTGAATCTC
GATCTGTTCC AGCCCTGGCC GGCGCTCTCC GCACAGGTTG ACAGCCACCA ACTGCTCGCC
GTCATCGCCG GCTACGTCAC CGTGCTGGTC CAGGTCGCTT TCCCGTTCAC TGTGTTCAGC
AAGCTCAAAT ACCCCGTCCT GTGCGTGCTG CTGAGCATGC ATGTCGGGAT CGCCGTCCTG
CTGGGACTGC CGATGTTCTC CGGCAGCATG ATCGTCGCCG ACATCGTGTT CCTGTCGGAC
GGCCTGATTA TGCGCCTCGC GAGACGGCTT CGGCCCAAAC GGTATGGGCG CGTATCAGCT
TCCGCCTAG
|
|---|
| Protein sequence | MTSDQAIRSD TGVAANVVPT SIVPAAGTVR RPDPVARAYT FLTEHAVSLQ AASLLRIGYG
LLYLVFLLRE FPHRDEIWGP GSPWTPALAR ELFGQTGWFS ILTLSDNPWY FELCYGFALV
TAALFMLGWH TRVLSLLFAL VVLSFHARSI YMADGGDNLT VLMSLYLVLT DCGRCRSLDA
RRRRRASSRV AGWPDAPHQS PSSARQQADL ARRMLSTLLH NCGMFVIAAQ VCILYGAAGL
YKVQGDLWRD GTALHYVLNL DLFQPWPALS AQVDSHQLLA VIAGYVTVLV QVAFPFTVFS
KLKYPVLCVL LSMHVGIAVL LGLPMFSGSM IVADIVFLSD GLIMRLARRL RPKRYGRVSA
SA
|
|---|
| |