Gene Caci_4973 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4973 
Symbol 
ID8336327 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp5687553 
End bp5688056 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content65% 
IMG OID644958072 
Producthistone family protein DNA-binding protein 
Protein accessionYP_003115674 
Protein GI256394110 
COG category[L] Replication, recombination and repair 
COG ID[COG0776] Bacterial nucleoid DNA-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00898585 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.280126 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTGAACA AGGCGGATCT GGCTGCCGAG GTGGCGGAGC AGATGAGCGG CGCCGAACCT 
GATGCGCGGC AGTATGTCGA CGCGGTGTTC GACGTCATCA TGCGGCACGT CGCCGCTGGG
GAACGAGTGC AGATTCTCGG GTTCGGCACG TTCGACAGCG TGCAGCGCGC GGCCCGGCTC
GGGCGGAATC CGCAGACCGG GGCGGCGATC CAGGTTCCGG CCGGGACCTC GCCGCGTTTT
CATGCGGGGC AGACGTTCCG GACCCGGGTG GCGGAGGCAT CTGCGGTCCC GGCGGAGGCG
TCGCAGGATG TTGCGAAGCC GGTTGAGGCG AAGAAGATCA AGGCAGCGAA GCAGAAGGCT
GAGAAGAAGA CTGCCAAGAA GCCCGAGAAG ATTGCTAAGA AGCCCGAGAA GGTTGCCAAG
AAGCCCGAGA AGGCTGGCAA GGCTGCTGGC AAGGCCAGCA AGGGGGGCAA AGCAGGCAAG
GCAGCCAAGG CGGGCAAGAA GTAG
 
Protein sequence
MVNKADLAAE VAEQMSGAEP DARQYVDAVF DVIMRHVAAG ERVQILGFGT FDSVQRAARL 
GRNPQTGAAI QVPAGTSPRF HAGQTFRTRV AEASAVPAEA SQDVAKPVEA KKIKAAKQKA
EKKTAKKPEK IAKKPEKVAK KPEKAGKAAG KASKGGKAGK AAKAGKK