| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4947 |
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| Symbol | |
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| ID | 8336301 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 5648321 |
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| End bp | 5650255 |
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| Gene Length | 1935 bp |
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| Protein Length | 644 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644958046 |
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| Product | Alpha-L-fucosidase |
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| Protein accession | YP_003115648 |
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| Protein GI | 256394084 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3669] Alpha-L-fucosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00851313 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAACC CTGTGTCCCG ACGCGCCGTG CTGTCCGGCA CGGCGGCGGC AATAGCCGCC
ACGAGTCTCA CCGCCGGCGG CGAGAGCCCT GCCGCCGCCG TACAAACCGC TGCCGCGCAA
GCCAATCCGC TGGTACCCCT CCGGATCCCG AAGCTGGACC AGGGCATGTG GCAGCAGCCC
GACGCGACCA TCCAGTGGCT GCGCGACACC CGGCTGGGCA TGTTCATCCA CTGGGGCGTC
TACGCCGGCC CGGCACACGG CGAGTGGTAC ATGCACTCGG CCGCGATCAC TCCGGCTGCC
TACCAGAACT TCGTCACGCA GTCCTCGCCG CAGCAGTTCA CCGCCGACGC CTACAAGCCC
TCCGACTGGG CCGCCCTGGC CAAGCAGCTC GGCGCCGGCT ACACCGTGCT GACCGCCCGA
CACCACGACG GCTTCGCGCT GTGGCCCAGC ACCTACCCCG CCGGCTGGAA CGCCGGACAG
GCACCGCTGA AGCGCGATTT CGTCAAGGAC TACGTCGCTG CGGTCCGCGC GGCAGGTCTG
CGGGTCGGCC TGTACTACTC CCCGATCAAC TGGCGCTACC CCGGCTACTA CGACGTCACC
GGTACCAACT GCGCACCCAA CCCGTGGGGC TACACCACCG ACCCGGCGCA CCACGAGAAC
GCGCGCCTGA TGAAGGAGGA GGTCTATCAG TGCGTCAAGG AACTGGTGAC CCAGTACGGC
GCGCTCGACG ACATCTGGTG GGACGGCGGC TGGCTGGCCG AGCAGGGCAG CGACGCCGAC
GCGTCGTTCT TCTGGGAGCC GGGCCGCTAC CGGGACTCCG GTAACGGCTG GCAGGTGGAC
GCCGCCTACG GCGCCACCGA GACCGGCACC GGACTGCCGC TGGGACTCGC CGGCCTGGTG
CGCCAGAGCC AGCCGACGGC GCTGGCCTCG CCCCGGTCGG GCTGGGTCGG CGACTACGAC
GTCGACGAGG GCGGCTCCGT GCCCGCCGGC CGCCTGCGGT CCGGCCACCT GGTGCAGAAG
ACGTTCAGCG TCGGCAGCAC CTGGGGCTAC AACTCCGACG GCGCCGTGAT GAGCCACGCC
TCGGCCATGG CCTTGCTGGT CAACAGTTTC ATCCGGGACA TGTGTGTGCT GATCAACGTG
GGACCGGACC GCCACGGTAC CGTCCCGGCG AATCAGGCCG CCCTCATGCA ACAGCTGGGC
ACGTTCATGA AAGCCAACGG CGAAGCGGTC TACAACACCC GCGGCGGACC ATGGGACCCG
GTGGACGGCC AGTACGGCTT CACCTTCAGC GGACAGACCG TCTACGTCCA TCTCCTGCCC
GGCTACTCCG GAAGCAGCTT CACCACGCCG GCACTGGGCG ATGCCCGCGC CGTCCGAGCC
TACGACGTGG TCTCACACGC CCCGCTCACC CTCGGTACCG GTTCCGGAAA CCAGGCCACG
ATCAGCGGTA TCGACCGCAC CCGCTACCCG GACGACACCG TCGTCGCGCT CGTCCTGGAC
CGGACGGTCG TCCCCGCCGA CATCGCCCTG GGCCGCACCG CCGGCGCGGA CAGCGTCGAG
ACCGCCCACG GCAACCTCGC CTCCCACGCC GTGGACGGCG ACACCTCCAC CCGCTGGTGT
GCGAGCGACG GTGCCGCCGG CCACTGGCTG ACCGTGGACC TCGGCGGCGT CCACACCGTC
ACCGGGGCGC GCGTCGCCTG GGAATTCGGT GGACACCGGT ACGGGTACCG GATCGACGGC
TCCACCGACG GCACGTCCTG GACGACGCTT TCCGACCAGA GCGCGACCGG CAGCACCTCC
CAAGTCCAGA CCGTCGCCTT CACCGCGGCC ACGCGCCACC TGCGGATCAC CGTCACCGCC
CTGGACGCCG GCTGCTGGGC TTCGATCCGT TCCTTCGAGG TCTACGACCG GGCCTTCTAC
GATCCTTCGC TGTAG
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| Protein sequence | MTNPVSRRAV LSGTAAAIAA TSLTAGGESP AAAVQTAAAQ ANPLVPLRIP KLDQGMWQQP
DATIQWLRDT RLGMFIHWGV YAGPAHGEWY MHSAAITPAA YQNFVTQSSP QQFTADAYKP
SDWAALAKQL GAGYTVLTAR HHDGFALWPS TYPAGWNAGQ APLKRDFVKD YVAAVRAAGL
RVGLYYSPIN WRYPGYYDVT GTNCAPNPWG YTTDPAHHEN ARLMKEEVYQ CVKELVTQYG
ALDDIWWDGG WLAEQGSDAD ASFFWEPGRY RDSGNGWQVD AAYGATETGT GLPLGLAGLV
RQSQPTALAS PRSGWVGDYD VDEGGSVPAG RLRSGHLVQK TFSVGSTWGY NSDGAVMSHA
SAMALLVNSF IRDMCVLINV GPDRHGTVPA NQAALMQQLG TFMKANGEAV YNTRGGPWDP
VDGQYGFTFS GQTVYVHLLP GYSGSSFTTP ALGDARAVRA YDVVSHAPLT LGTGSGNQAT
ISGIDRTRYP DDTVVALVLD RTVVPADIAL GRTAGADSVE TAHGNLASHA VDGDTSTRWC
ASDGAAGHWL TVDLGGVHTV TGARVAWEFG GHRYGYRIDG STDGTSWTTL SDQSATGSTS
QVQTVAFTAA TRHLRITVTA LDAGCWASIR SFEVYDRAFY DPSL
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