| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4929 |
|---|
| Symbol | |
|---|
| ID | 8336283 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 5622557 |
|---|
| End bp | 5623312 |
|---|
| Gene Length | 756 bp |
|---|
| Protein Length | 251 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 644958028 |
|---|
| Product | GntR domain protein |
|---|
| Protein accession | YP_003115630 |
|---|
| Protein GI | 256394066 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2186] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.49385 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTGAGCG TGACATCGCA GGACGAGGAC GGTGCCCGGG GCGGCGGCTC CTATCGGCCG
GGATACGAGC TCGCGGCCGA GCGGATCCTG GAGCTCATCG CCGAGTCCGG CCTGCGGCCG
GGGGACCGGA TGCCGACCGA GATCGAGCTG GCGGCGCGGC TGGGCACCAG CCGGACCGTG
GTCCGGGAGG CGGTCAAGAT CCTCTCCGCG CTCGGCCGGG TCAGCGCGCA GAAGGGCCGC
GGCCTCTACG TCGCCGACGA CGAGGGGATG CTGGGCTCGG CCGGCTGGGG CGGGTTCTTC
CTGCCGACCG ATCTGGACCA CGTCTACATG CTCTTCGAGT TCCGCCGGAT CCAGGAGTCC
GCCGCCGCCC GGCTGGCCGC GACCCACGCC ACGCCGGCCG AGCTCCAGGT CATCGAGACC
GCGGCCGAGC TGTGCCGCCA GGGCCACCTG ACCGCGCGCT CGGAGCTGTT CGACCGCGGC
GACGACGACT TCCACCTCGG CATCGCCGCG GCGTCGCACA ACGCGTTCCT GCTCGCCGCG
GTGCGGGAGG CGCGCCGGTT GCAGCGCCAG TCCAGCATCA TCGGCCTGCA CGGCTCGGTG
GGCGGCCACG CCGCGGAGGC CGTCGCCGAG CACGCCGCGA TCTACCGGGC GATCCGGGAC
GGCGACCCCG ACGCCGCGGC GCTGGCGGCC GCCGTCCACA TCGAGAACAC GTTGGAGGAC
TACCGCCGCG AGATCCAGCG CCGGCTGTTC GGCTGA
|
|---|
| Protein sequence | MVSVTSQDED GARGGGSYRP GYELAAERIL ELIAESGLRP GDRMPTEIEL AARLGTSRTV
VREAVKILSA LGRVSAQKGR GLYVADDEGM LGSAGWGGFF LPTDLDHVYM LFEFRRIQES
AAARLAATHA TPAELQVIET AAELCRQGHL TARSELFDRG DDDFHLGIAA ASHNAFLLAA
VREARRLQRQ SSIIGLHGSV GGHAAEAVAE HAAIYRAIRD GDPDAAALAA AVHIENTLED
YRREIQRRLF G
|
|---|
| |