Gene Caci_4918 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4918 
Symbol 
ID8336272 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp5608019 
End bp5608876 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content72% 
IMG OID644958017 
Productamidohydrolase 2 
Protein accessionYP_003115619 
Protein GI256394055 
COG category[R] General function prediction only 
COG ID[COG3618] Predicted metal-dependent hydrolase of the TIM-barrel fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCGCA TCGACGCGCA CCACCACCTG TGGAAGCTGG CCGACCGGCC GCAGGCCTGG 
CTCGACGGAC CCGGCACGGC CGCCATCCGC CGCGACTTCA CCCTCGCCGA CCTGCGCGCC
GAGACCACCG CGGCCAAGAT CGACCACACG ATCCTGATCC AGGTCCTGCC CGACCTGGAC
GAGACCTGGG ACTTCCTGGC GCTCGCCGCC GGCTCCGACC TCGTCGCCGG GGTGGTCGGC
TGGGCGGATC TGACCGCGCC GGTGATCCCC GACGTCCTGG CGGCGCTGCG CGGCGTGCGC
GGCGGCGACA AGCTCCTCGG CGTCCGGCAC CTCGTCCAGG GCGAGCCGGA TCCGGCGTGG
CTGAACCGTC CCGACGTCCG GCGCGGACTG AAGGCGCTCG CCGAGGCCGA CCTGGTCTAC
GACCTGCTGA CCGTGCCGCA TCAGCTCCCT GCCGCGATCG ACACCGTGCG CGCCCTGCCG
GAGCTGACGT TCGTGCTGGA CCACCTGTCC AAACCGCCGA TCGCCTCGGG GGACACCGAG
CCGTGGGCCT CGCGGATCCG GGAGCTGGCC GCCGAGCCGA ACGTCTTCTG CAAGCTGTCC
GGCATGGTCA CCGAAGCCGA CCGCGATACC TGGCGCATCG ACGATCTGCG TCCGTACGCC
GACACCGTGC TCGAGGCCTT CGGCCCGTCC CGGGTGATGT TCGGCTCCGA CTGGCCGGTC
TGCCTGCTCG CCGCGACCTA TGACGAAGCC TGTCATGTCG CCGAGTCGCT GACCGCGCAC
CTCGGCTCCG AAGAACGGGC CGACGTCTTC GGCGGCACCG CCGTCCGCGC CTACGGGCTG
GCGGCGGAGC CGGAATGA
 
Protein sequence
MPRIDAHHHL WKLADRPQAW LDGPGTAAIR RDFTLADLRA ETTAAKIDHT ILIQVLPDLD 
ETWDFLALAA GSDLVAGVVG WADLTAPVIP DVLAALRGVR GGDKLLGVRH LVQGEPDPAW
LNRPDVRRGL KALAEADLVY DLLTVPHQLP AAIDTVRALP ELTFVLDHLS KPPIASGDTE
PWASRIRELA AEPNVFCKLS GMVTEADRDT WRIDDLRPYA DTVLEAFGPS RVMFGSDWPV
CLLAATYDEA CHVAESLTAH LGSEERADVF GGTAVRAYGL AAEPE