| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4906 |
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| Symbol | |
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| ID | 8336260 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 5591111 |
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| End bp | 5592922 |
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| Gene Length | 1812 bp |
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| Protein Length | 603 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644958005 |
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| Product | Ricin B lectin |
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| Protein accession | YP_003115607 |
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| Protein GI | 256394043 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG5520] O-Glycosyl hydrolase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.20179 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCACGAG CATTACGGCG CGTCGGCACT GCCGGCGCGC TGGCCGGCAT ACTCGGACTG
GCTCTGCTGG TGATGCCGGC ACCGCCGGCC TCGGCCGCCA ACGAGACGGT CCACAAGTGG
CTGACGACAT CAGATCTGAG CCAACACCTG ACGCAACAGA CTGATCTCGG CTTCTCCGCG
TCGTCCGGTT CGGGGACCAT CAGCGTCGAC AACACGCAGA AGTTCCAGAG CATCGTGGGC
TTCGGCGCCG CGATGACGGA CAGCTCGGCA TGGCTGCTCT CCGACAAGCT GAGCAGCACG
GCTCACACGA ACCTGATGAA CGCGTTGTTC AGCCCGAGCC AGGGCATCGG GATGAGCTGG
GTGCGGGTTC CGATGGGCTC CTCGGACTTC TCCGCCACGG CACAGCCGTA CTCCTACGAC
GACAACCTGT CGGCGTCCAC GGGCACCACG GTCGGCGTCG GTTCCGGACG CTGCCTGGAC
GACACCGGCA ACACGGCGAA CGGCACGCAG ATCTACATCT GGGACTGCAC CAGCGGCAAC
GCCAACCAGC AGTTCGCCTA CACCAGCGCC TCGGAACTGC AGGTCGCCGG CAAGTGCCTG
GACGCCAACG GCAAGGGCAC CGCCAACGGC ACCAAGGTGA TCCTGTGGAC GTGCAACGGC
CAGGCGAACC AGCAGTGGAA ACTGAACACC AACGGCTCGA TCACCGGCGT GCAGTCCGGA
CTGTGCCTGG ACGTCTCCGG CGCGGCCACG GCCAACGGCT CGCTGATGCA GCTGTGGGCC
TGCAACGGCG CGACGAACCA GCGATGGACC CGGCCCGACC CGGCGCTCGC GAACTTCTCG
ATCGCGCACG ACCTGCAGTA CATCGTCCCG GACCTGAAGG AAGCGCTCGC GCTCAACCCG
GGCCTGAAGC TCATGGCGAA CCCGTGGAGC CCGCCGGGGT GGATGAAGAC GAACGGCCAG
ATGAACAACG TCAACAACGC CGGATCGCTG CTTCCCGCCA GCTACGGACC GCTGGCCCAG
TACTTCGTGA AGTTCCTCCA GGGCTACGCC GCGCAAGGCA TCCCGATCGC CGCGATCACC
CCGCAGAACG AGCCGTCCTA CGCCACCGCC TACCCGGGGA TGCAGTTCAG CGAGCAGAAC
GAAGCGGACT TCATCGCGAA CAACCTCGGG CCCGCCCTGG CCCAGGCGAA CCTCTCCCCG
GCGCTGCTCG GCACCGACTT CAACACCAAC GTGCTCAGCG ACTACGCCGA GCCGCTGATG
CAGAACGCGA ACGCCGCCAA GTACCTGGCG GGGACGTCCT GGCACTGCTA CGCCGGCGGC
CTGAACGCCA TCAGCACCAT GCAGGCGGCG TTCCCGACCA AGGACAACTA CGAGACCGAA
TGCTCTGACG GCATCGACCC GCAGAACGCG ATCGAGACCT TCATCCAGAG CACCCGCAAC
TCGGCGCGGA CCGCCACGAT GTGGAACATC GTCCAGGACC AGAACAACGG CCCGGTGATC
CCCGGCGGCT GCAACGCCTG CACCCCGCTG GTCACCGTCA ACCAGAGCAC CGGGAACGTG
ACCTACGACG CCGGGTACTA CTCGGTCGGC CACTTCAGCA AGTTCGTGCT CCCCGGCGCG
AAGCGCATCG CCTCGACCAC CACCGCGAAC CTCGACAACG TGGCGTTCCA GAATCCGGAC
GGCTCGCTCG TGCTGATCGT CGACAACACC TCCAGCTCGA CGCAGTCCTT CAGCACCAGC
TGGGGCGGCC AGAAGTTCAG CGACTCGCTG CCCGGCCACG GCATCGCGAC GTACGAGTGG
AAGCCGGCGT GA
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| Protein sequence | MPRALRRVGT AGALAGILGL ALLVMPAPPA SAANETVHKW LTTSDLSQHL TQQTDLGFSA
SSGSGTISVD NTQKFQSIVG FGAAMTDSSA WLLSDKLSST AHTNLMNALF SPSQGIGMSW
VRVPMGSSDF SATAQPYSYD DNLSASTGTT VGVGSGRCLD DTGNTANGTQ IYIWDCTSGN
ANQQFAYTSA SELQVAGKCL DANGKGTANG TKVILWTCNG QANQQWKLNT NGSITGVQSG
LCLDVSGAAT ANGSLMQLWA CNGATNQRWT RPDPALANFS IAHDLQYIVP DLKEALALNP
GLKLMANPWS PPGWMKTNGQ MNNVNNAGSL LPASYGPLAQ YFVKFLQGYA AQGIPIAAIT
PQNEPSYATA YPGMQFSEQN EADFIANNLG PALAQANLSP ALLGTDFNTN VLSDYAEPLM
QNANAAKYLA GTSWHCYAGG LNAISTMQAA FPTKDNYETE CSDGIDPQNA IETFIQSTRN
SARTATMWNI VQDQNNGPVI PGGCNACTPL VTVNQSTGNV TYDAGYYSVG HFSKFVLPGA
KRIASTTTAN LDNVAFQNPD GSLVLIVDNT SSSTQSFSTS WGGQKFSDSL PGHGIATYEW
KPA
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