| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4904 |
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| Symbol | |
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| ID | 8336258 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 5587771 |
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| End bp | 5589255 |
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| Gene Length | 1485 bp |
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| Protein Length | 494 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644958003 |
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| Product | Ricin B lectin |
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| Protein accession | YP_003115605 |
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| Protein GI | 256394041 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.146094 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCATAC GAGCAAGGCG CAGCACCGTC AGCGCCCTCA TCGCCGCAGT GACGACCGCC
CTGTCCCTCG TGGGTCTGTC CCAGACCTCG GCGCAGGCCG CGACGTCGCA GTTCTCGCCC
GGGCAGACGT GGAACGACAC CTCCGGCACC GCGCTGCAGA TGCACGGCCT CGGCATCGTC
AAGGTCGGCT CCACCTGGTA CGGCTTCGGC GAGGACAAGA CCGGGGAGAA CTCGGGCAAC
GCCGCCTTCC AGGACATCCC GTGCTACAGC TCCACCGACC TGTCGCACTG GACGCTGCAA
GGCAAGGCCC TGACCAGGCA GACCAGCGGC GACCTCGGAC CGAACCGCGT CGTGGAGCGC
CCCAAGGTCC TGTTCAACGC CAGCACTAAC ACCTTCGTGA TGTACATGCA CATCGACAGC
GCCAGCTACG GCGAGGCGAA GGTCGGGGTC GCGACCAGCA GCACACCGTG CGGCCCGTAC
AGCTACCGGG GAAGCTTCCA GCCGCTGGGC CGTCAGAGCC GCGACATCGG CTTGTTCCAG
GACACCGACG GCACCGGCTA CCTATTGTCC GAGGACCGCG CCAGCGGTCT GCGCGTCGAC
AAGCTCTCCG CGGACTACCT CAGCGTCGTG AGCGCGGGCG GCAGCGGCGG CAGCGTGGCG
CTGTTCGCCG ACTACGAGGC GCCCGCGATG GTCAAGACGA ACGGGACCTA CTTCGTCCTC
GGCTCGCATC TGACCGGCTG GAACCTCAAC GACAACGTGT ACGCCACGGC GACCTCGCTG
TCCGGCTCCT GGTCCTCCTT CAAGGACTTC GCCCCCGCCG GCACCAACAC CTACCAGACG
CAGACCGCGA ACATCATCCC GGTCTCGGGA AGCGCCGGCA CGTCCTACAT CTACGCCGGC
GACCGCTGGA ACCCGAACAA CCTCGGGGGA TCACAGCTGG TCTGGCTGCC CCTGACGCTG
TCCGGCACGA CGGCGAACGT CGGATGGCAG AACTCGTGGT CCCTCGATGT CGCCGCCGGC
ACCTGGTCCG GCAGCTCGAA TCCGGCGTCG GGCTCGACCC ACCACCTCAC CAACGCGAAC
AGCTCGATGG TGATGGACGT CAGCGGCGGT TCCACCGCGA GCGGCGGCGC GGTCATCCAG
TGGGCCGGCC ACGGCGGCAC CAACCAACAG TGGACTCTCC ACCAGGTCGC AGGGAACGTC
TACACCCTCA CCAACCAGAA CAGCGGCCTG TGCCTGGAGG TACCGAACCG CTCCACCGCC
ACCGGCACCG CGCTCGACCA GTGGACCTGC GGCGGCGGCA GCAACCAGCA GTGGGCCCTG
GACCCGGTCG GCAGCTACAC CTCCTCCAGC GACGCCAGCT ATGAGCTCAC CAACCTGAAC
AGCGGCCTGG TCGCCGACGT CTCCGGTGGT TCCACCGCCC AGGGCGCGCA GGTGATCCAG
TGGACGACCA ACGGTCAGGC GAACCAGACA TGGACGTTGT CGTGA
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| Protein sequence | MPIRARRSTV SALIAAVTTA LSLVGLSQTS AQAATSQFSP GQTWNDTSGT ALQMHGLGIV
KVGSTWYGFG EDKTGENSGN AAFQDIPCYS STDLSHWTLQ GKALTRQTSG DLGPNRVVER
PKVLFNASTN TFVMYMHIDS ASYGEAKVGV ATSSTPCGPY SYRGSFQPLG RQSRDIGLFQ
DTDGTGYLLS EDRASGLRVD KLSADYLSVV SAGGSGGSVA LFADYEAPAM VKTNGTYFVL
GSHLTGWNLN DNVYATATSL SGSWSSFKDF APAGTNTYQT QTANIIPVSG SAGTSYIYAG
DRWNPNNLGG SQLVWLPLTL SGTTANVGWQ NSWSLDVAAG TWSGSSNPAS GSTHHLTNAN
SSMVMDVSGG STASGGAVIQ WAGHGGTNQQ WTLHQVAGNV YTLTNQNSGL CLEVPNRSTA
TGTALDQWTC GGGSNQQWAL DPVGSYTSSS DASYELTNLN SGLVADVSGG STAQGAQVIQ
WTTNGQANQT WTLS
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