Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_4901 |
Symbol | |
ID | 8336255 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 5584860 |
End bp | 5585741 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644958000 |
Product | amidohydrolase 2 |
Protein accession | YP_003115602 |
Protein GI | 256394038 |
COG category | [R] General function prediction only |
COG ID | [COG2159] Predicted metal-dependent hydrolase of the TIM-barrel fold |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0686596 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGCGC CGATGACCGT CGGCGGACTC ACCGCCATCG ACGTCCACAC CCACGCCGAG GTCTCGGCGA AGGGACACGG CTCGCTGTCC GAGGAGCTGG ACGCGGCCGC GGGCGAATAC TTCAAGACCG AGCACCGCCG GCCGACGCTG CCGGAGATCG CGGCGTACTA CCGCGAGCGG AACATGGCCT GCGTCGTGTT CACCGTCGAC GCCGAAAGCG CGACCGGGAC CCCCGCGGTG CCCAACGAGG AAGTCGCCGA GGCCGCGGCC GCGAACCCGG ACGTCATCAT CCCGTTCGCC AGTATCGATC CGTACAAGGG CCGGCTCGGC GTCAACCAGG TCAAGCGGCT GGTGCGCGAG TTCGGCGTCC GGGGCTTCAA GTTCCACCCC AACGTCCAAG GGTTCGCGCC GAACGACCGG CTGGCGTACC CGCTGTACGA GGCCATCGAG GCCGAAGGCG CCATCGCCGT GTTCCACACC GGCCAGACCG GCATCGGCGC CGGCGCCAGG GGTGGCGGCG GCATCCGGCT CAAGTACAGC AACCCGATGC TGGTCGACGA CGTGGCGGTG GACTTCCCCG ACATGCCGAT CATCCTGGCG CACCCCTCGT TCCCCTGGCA GGACGAGGCA CTCGCGGTGG CGACCCACAA AAGACAGGTC CACATCGACC TGTCCGGCTG GTCGCCGAAG TACTTCCCGC CGCAGCTGGT GCAGTACGCC AATACCCTGC TGCAGGACAA GGTGCTGTTC GGCTCGGACT ACCCGCTGCT GACCCCGGAC CGCTGGCTGG CCGACTTCGC GAAGCTGCCG ATCAAGGACG AGGTCCGCCC CAAGATCCTC AAGGAGAACG CGGCCAGGCT GCTCGGCCTG ACCGCCGGTT GA
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Protein sequence | MDAPMTVGGL TAIDVHTHAE VSAKGHGSLS EELDAAAGEY FKTEHRRPTL PEIAAYYRER NMACVVFTVD AESATGTPAV PNEEVAEAAA ANPDVIIPFA SIDPYKGRLG VNQVKRLVRE FGVRGFKFHP NVQGFAPNDR LAYPLYEAIE AEGAIAVFHT GQTGIGAGAR GGGGIRLKYS NPMLVDDVAV DFPDMPIILA HPSFPWQDEA LAVATHKRQV HIDLSGWSPK YFPPQLVQYA NTLLQDKVLF GSDYPLLTPD RWLADFAKLP IKDEVRPKIL KENAARLLGL TAG
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