Gene Caci_4901 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4901 
Symbol 
ID8336255 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp5584860 
End bp5585741 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content69% 
IMG OID644958000 
Productamidohydrolase 2 
Protein accessionYP_003115602 
Protein GI256394038 
COG category[R] General function prediction only 
COG ID[COG2159] Predicted metal-dependent hydrolase of the TIM-barrel fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0686596 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGCGC CGATGACCGT CGGCGGACTC ACCGCCATCG ACGTCCACAC CCACGCCGAG 
GTCTCGGCGA AGGGACACGG CTCGCTGTCC GAGGAGCTGG ACGCGGCCGC GGGCGAATAC
TTCAAGACCG AGCACCGCCG GCCGACGCTG CCGGAGATCG CGGCGTACTA CCGCGAGCGG
AACATGGCCT GCGTCGTGTT CACCGTCGAC GCCGAAAGCG CGACCGGGAC CCCCGCGGTG
CCCAACGAGG AAGTCGCCGA GGCCGCGGCC GCGAACCCGG ACGTCATCAT CCCGTTCGCC
AGTATCGATC CGTACAAGGG CCGGCTCGGC GTCAACCAGG TCAAGCGGCT GGTGCGCGAG
TTCGGCGTCC GGGGCTTCAA GTTCCACCCC AACGTCCAAG GGTTCGCGCC GAACGACCGG
CTGGCGTACC CGCTGTACGA GGCCATCGAG GCCGAAGGCG CCATCGCCGT GTTCCACACC
GGCCAGACCG GCATCGGCGC CGGCGCCAGG GGTGGCGGCG GCATCCGGCT CAAGTACAGC
AACCCGATGC TGGTCGACGA CGTGGCGGTG GACTTCCCCG ACATGCCGAT CATCCTGGCG
CACCCCTCGT TCCCCTGGCA GGACGAGGCA CTCGCGGTGG CGACCCACAA AAGACAGGTC
CACATCGACC TGTCCGGCTG GTCGCCGAAG TACTTCCCGC CGCAGCTGGT GCAGTACGCC
AATACCCTGC TGCAGGACAA GGTGCTGTTC GGCTCGGACT ACCCGCTGCT GACCCCGGAC
CGCTGGCTGG CCGACTTCGC GAAGCTGCCG ATCAAGGACG AGGTCCGCCC CAAGATCCTC
AAGGAGAACG CGGCCAGGCT GCTCGGCCTG ACCGCCGGTT GA
 
Protein sequence
MDAPMTVGGL TAIDVHTHAE VSAKGHGSLS EELDAAAGEY FKTEHRRPTL PEIAAYYRER 
NMACVVFTVD AESATGTPAV PNEEVAEAAA ANPDVIIPFA SIDPYKGRLG VNQVKRLVRE
FGVRGFKFHP NVQGFAPNDR LAYPLYEAIE AEGAIAVFHT GQTGIGAGAR GGGGIRLKYS
NPMLVDDVAV DFPDMPIILA HPSFPWQDEA LAVATHKRQV HIDLSGWSPK YFPPQLVQYA
NTLLQDKVLF GSDYPLLTPD RWLADFAKLP IKDEVRPKIL KENAARLLGL TAG