| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4881 |
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| Symbol | |
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| ID | 8336235 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 5556864 |
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| End bp | 5559095 |
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| Gene Length | 2232 bp |
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| Protein Length | 743 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644957980 |
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| Product | glycoside hydrolase family 6 |
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| Protein accession | YP_003115582 |
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| Protein GI | 256394018 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG5297] Cellobiohydrolase A (1,4-beta-cellobiosidase A) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.106483 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCTGGT GGGGCGTCCA AGCGGCTCAG GCAACGTCAG TAGCCCCGGC AGCGGCGGCA
GCCGCGCACG CGGCCAACCC CTTCGTCGGG TCGAGCCCGT ATCTGAACCC TGACTACGTC
TCCGAGGTCC AGTCGCAGGC GTCCGCCGAC GGCAGCTCCG CCGAGGCCAA GGTCGGCGCG
TACCAGACCG CGATCTGGAT GGACCACATC GGCGCGATCG CCGGCGACAG CAGCCACCTG
GGCCTGAAGG CGCAGCTGGA CAAGGCCGAG ACGCAGGCCG CCGGGACCAC CAGCCCGGTG
GAGGTCGAGG TGGTCGTCTA CGACCTGCCC GGCCGGGACT GCGCGGCGCT GGCCTCCAAC
GGCGAGATCC CGGCGACCGA CGCCGGGCTG ACCCAGTACG AGTCGCAGTA CATCGACCCG
ATCGTGGCCA TCGAGGGCGC CTCGGGCTAC AGCAACCTGC GGATCGTGAA CTTCGTCGAG
CCGGACTCGC TGCCCAACGC GGTCACCAAC CAGAGCAAGT CCGCGTGCGC CGCCGCGACG
CCCTACTACG AGAAGGGCAT CGCCTACGCG CTGGGCAAGC TGCACGGGAT CGGCTCGCAG
ATCTACAACT ACCTGGACAT CGGCCACTCC GGCTGGCTCG GCTGGCCCAA CAACATGACC
GGCGCCGGTC CTGAGTACGC CAAGGTCGTG CAGGCCGCGA CCGGCGGCTA CGCGACGGTC
GACGGCTTCG TCTCGGACAC CGCGAACACC ACCCCGTCCG ACGAGCCGTT CCTGCCGAAC
TCCAACCTCA CCGTCGGCGG CCAGCCGCTG AAGTCGGCGA ACTTCTACCA GTACAACCCG
TACTTCGACG AGCACAGCTA CGACGAGGCG ATGTACAGCG AGTTCGTCTC CAGCGGCTTC
CCGTCCAGCG TGGGCATGAT CATCGACACC TCGCGCAACG GCTGGGGCGG CACGTCCCGG
CCCACCTCGC TGAACTCCAG CCCGACCGAC GTCAACAGCT ACGTGAGCGC GAACAAGGTC
GACCTGCGGC CGTTCCGCGG CGACTGGTGC AACGTCAACG GCGCGGGCAT CGGCGCGCGG
CCGCAGGCCA ACCCCTACGG CTCCGGCGAC CACGTCATCG CCGACGTGTG GATCAAGCCC
CCGGGGGAGT CGGACGGCGA CTACCCGAGC TCCTCGCACT CGCACGGCGA CCCGCACTGC
GACCCGGCCG GCACCCAGAC CGACGGCAAC GGCGGCACCT ACCCGACCGA CGCCATCCCC
GGCTACGACG TCCCGGCCGG ACAGTGGTTC GCCTTCCAGT TCAAGCAGCT GGTGCAGAAC
GCCTACCCGG CCCTCGGCGG GACCACCGGC GGCGACACCA CGCCGCCGAG CGCGCCCAGC
GGCCTGACCG TGGCCTCGAA GACCAGCAGC AGCGTCTCGC TGACCTGGAC CGCCTCGACC
GACAACGTCG GCGTGACCGG CTACGACATC TACCGCGGCA CGACGCTGGC CGGCACCTCG
GCCACCCCCA GCTTCACCGA CACCGGCCTG ACCGCCTCGA CGCAGTACTC GTACACGGTC
AAGGCCTTCG ACGCCGCGGG CAACCTCTCC TCGGCCTCCA GCGCGGTCAC CGCCACCACC
AGCGGCGGCT CCACCGGCGG TGACACCACG CCGCCCTCGA CCCCGACCAA CGTCACCGCC
AGCGGCGTGA CCAGCACCGG CGCCACCCTG TCCTGGTCGG CGTCCACGGA CAACGTGGGC
GTGGCGGGCT ACCACGTCTA CCGGAGCGGC ACCCTGGTCG GCACCACGAC CACCACGTCC
TTCGCCGACA CCGGCCTGAC CGCCTCGACG CAGTACTCGT ACACCGTGGT CGCCTACGAC
GCGGCGGGCA ACCTCTCCCC GGCCTCCGCC GCGGTGTCGG TGACGACCTC GGGCGGCAGC
ACCGGCGGCT CCGGCTGCGC CGCCACCTAC CAGATCGGCA GCGACTGGGG CAGCGGCTTC
ACCGCCAACG TCACCGTCAC CAACACCGGC ACCGCCCCGA CCAAGTCCTG GAAGGTCACC
TGGACCTGGG CCGGCAACCA GCAGGTCACC AGCATGTGGA ACGCCGCCAG CCAGCAAAGC
GGCCACAGCG AGACCGCCAC CAGCATGGCC TACAACGGCG CGATCGCGGC CGGAGGCAAC
ACCACCTTCG GCTTCCAGGG CACCTACAGC GGCAGCAACG CCAACCCGAC GCTCACCTGC
AGCGCCAGCT GA
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| Protein sequence | MPWWGVQAAQ ATSVAPAAAA AAHAANPFVG SSPYLNPDYV SEVQSQASAD GSSAEAKVGA
YQTAIWMDHI GAIAGDSSHL GLKAQLDKAE TQAAGTTSPV EVEVVVYDLP GRDCAALASN
GEIPATDAGL TQYESQYIDP IVAIEGASGY SNLRIVNFVE PDSLPNAVTN QSKSACAAAT
PYYEKGIAYA LGKLHGIGSQ IYNYLDIGHS GWLGWPNNMT GAGPEYAKVV QAATGGYATV
DGFVSDTANT TPSDEPFLPN SNLTVGGQPL KSANFYQYNP YFDEHSYDEA MYSEFVSSGF
PSSVGMIIDT SRNGWGGTSR PTSLNSSPTD VNSYVSANKV DLRPFRGDWC NVNGAGIGAR
PQANPYGSGD HVIADVWIKP PGESDGDYPS SSHSHGDPHC DPAGTQTDGN GGTYPTDAIP
GYDVPAGQWF AFQFKQLVQN AYPALGGTTG GDTTPPSAPS GLTVASKTSS SVSLTWTAST
DNVGVTGYDI YRGTTLAGTS ATPSFTDTGL TASTQYSYTV KAFDAAGNLS SASSAVTATT
SGGSTGGDTT PPSTPTNVTA SGVTSTGATL SWSASTDNVG VAGYHVYRSG TLVGTTTTTS
FADTGLTAST QYSYTVVAYD AAGNLSPASA AVSVTTSGGS TGGSGCAATY QIGSDWGSGF
TANVTVTNTG TAPTKSWKVT WTWAGNQQVT SMWNAASQQS GHSETATSMA YNGAIAAGGN
TTFGFQGTYS GSNANPTLTC SAS
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