| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4880 |
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| Symbol | |
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| ID | 8336234 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 5553632 |
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| End bp | 5555308 |
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| Gene Length | 1677 bp |
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| Protein Length | 558 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644957979 |
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| Product | Ricin B lectin |
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| Protein accession | YP_003115581 |
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| Protein GI | 256394017 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3345] Alpha-galactosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0253313 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCGGG CTGCGATCCT TGCCGTGGTC TGCGCGCTGG CCTCGCCTGT CGGGCTGGTC
GGCTCGCGCG TGCAAGCCGC CGTGGCGGAC TCCCCGGCGC GTGCGGCGCC TGCGGCGGTG
GCGGCGGCCT CGACGGTGAG CGCGCCGCCG ATTGGCTGGG CGTCGTGGAA CACTTTCGCC
GCGCAGATCA ACTACAACGT CATCAAGGGG CAGGCCGACG CGTTGGCGTC CTCCGGCATG
GAAGCCGCCG GCTATCAGTA CGTGAACATC GACGAGGGCT GGTGGCAGGG TACCCGCGAC
GCCTCCGGAA ACATCACGGT GGACTCGGCA GACTGGCCCG GCGGGATGAA GGCCATCGCC
GACTACATCC ACAGCAAGGG GTTGAAGGCC GGGATCTACA CCGACGCCGG GAAGAACGGC
TGCGGCTACT ACTACCCGAC CGGCCGTCCT GCGGCTCCGG GAAGCGGCAG CGAAGGTCAT
TACGATCAGG ACTTCCTGCA GTTCTCCCAG TGGGGCTTCG ACTACGTCAA GGTCGACTGG
TGCGGCGGCA ACGCCGAGGG CTTGAACGCG CAGAACACCT ACCAGGCGAT CAGCGACGCG
ATCGGCCGCG CCACGGCGCA GACCGGCCGT CCGATGGTGC TGTCGATCTG TGATTGGGGC
AATCAGAGCC CGTGGAACTG GGCGCCTGGC ATGTCCGCGC TGTGGCGCAC CAGCGGCGAC
ATCATCTACT ACGGCCAAGC CCCCTCGATG ACCAACGTGC TGGCCAACTT CGACGCCGCG
CAGCATCCGG CCGCCCAAAG CCCCGGCCAC TACAACGATC CGGACATGCT GATCGCCGGC
ATGCCCGGAT TCACCGCGGC GCAGAACCGC ACCCACCTGA GCCTGTGGGC CATCTCCGGC
GCGCCCCTGT TGGCCGGCAA CAACTTGTCG ACTATGAGCA GCGACACCCG TGCCGTCCTG
ACCAACCCCG AAGCGATAGC CATCGACCAG GACTCCCGCG GCCAGCAGGG CGTGAAGGTG
GCCGAAGCCC AAAGCGGGCT GCAGGTGTAC AGCAAGGTCC TGTCCGGCAG CGGCCGCCGC
GCGGTGGTCC TACTCAACCG CACCGGCTCG ACGGCGACCA TCACCGCCCC ATGGTCGGCC
TTGGGACTGA CCGGCGCCGC CTCGGTCCGC GACGTGTGGG CCGCCGTCGA CCGCGGCAGC
TTCACCGGAA GTTACGCCGC CACCGTCCCC GCCGGCCAGG CCGTCCTGCT CACCGTGACC
GGCACCGACG GTACCGGCGG CGGCACCGGC AGCGCCAAGC AGATCATCGG CACCCCATCC
GGACGCTGCG TCGACATCAA CAACTCCTCC ACCACCAACG GCACCCAGGC CCAACTGTGG
GACTGCAACG GCCAAAGCAA CCAGCAGTGG ACCCCCACCG CCACCAAACA GCTGATGATC
TACGGCACCA AGTGCCTGGA CGCCTCCAAC CAGGGCACCA CCAACGGCAC CCCAGCCGTC
ATCTGGGACT GCAACGGCCA AACCAACCAG CAATGGACCA TCAACGCCAA CGGCACCATC
ACCGGCGTCC AATCAGGCCT CTGCCTCGAC GCCTCCGGCG CGGCCACCGC CAACGGCACC
AAGCTGCTGC TGTGGACATG CAGCGGCGCC GCCAACCAGA AGTGGACTGT GAAGTAG
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| Protein sequence | MLRAAILAVV CALASPVGLV GSRVQAAVAD SPARAAPAAV AAASTVSAPP IGWASWNTFA
AQINYNVIKG QADALASSGM EAAGYQYVNI DEGWWQGTRD ASGNITVDSA DWPGGMKAIA
DYIHSKGLKA GIYTDAGKNG CGYYYPTGRP AAPGSGSEGH YDQDFLQFSQ WGFDYVKVDW
CGGNAEGLNA QNTYQAISDA IGRATAQTGR PMVLSICDWG NQSPWNWAPG MSALWRTSGD
IIYYGQAPSM TNVLANFDAA QHPAAQSPGH YNDPDMLIAG MPGFTAAQNR THLSLWAISG
APLLAGNNLS TMSSDTRAVL TNPEAIAIDQ DSRGQQGVKV AEAQSGLQVY SKVLSGSGRR
AVVLLNRTGS TATITAPWSA LGLTGAASVR DVWAAVDRGS FTGSYAATVP AGQAVLLTVT
GTDGTGGGTG SAKQIIGTPS GRCVDINNSS TTNGTQAQLW DCNGQSNQQW TPTATKQLMI
YGTKCLDASN QGTTNGTPAV IWDCNGQTNQ QWTINANGTI TGVQSGLCLD ASGAATANGT
KLLLWTCSGA ANQKWTVK
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