Gene Caci_4878 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4878 
Symbol 
ID8336232 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp5552434 
End bp5552784 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content70% 
IMG OID644957977 
Producttranscriptional regulator, MerR family 
Protein accessionYP_003115579 
Protein GI256394015 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00750726 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.76428 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCAGGCA GTACCCGCTC CACCCCGGCC GACAGGCTGG ACGACGACGA CTATCCGGCC 
TACACAATGG GCCGGGCCGC CGAAATGATC GGCGCCACCC CCGCGTTCCT GCGGGCCTTG
GGCGAGGCCA AACTGATCGT GCCGCTGCGC TCCGACGGCG GCCACCGCCG CTACTCCCGC
TACCAACTGC GCATCGCCGC CCGCGCCCGC GAACTCGTCG ACACCGGCAC CCCCGTCGAC
GCCGCCTGCC GCATCATCAT CCTGGAAGAC CAACTCGAAG AAGCCCAACG CCTCAACGCC
GAACTCCGCC GACACGCAGC AGAGAACACC GCGCCCGCCG AGGGAACATG A
 
Protein sequence
MPGSTRSTPA DRLDDDDYPA YTMGRAAEMI GATPAFLRAL GEAKLIVPLR SDGGHRRYSR 
YQLRIAARAR ELVDTGTPVD AACRIIILED QLEEAQRLNA ELRRHAAENT APAEGT