Gene Caci_4867 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4867 
Symbol 
ID8336221 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp5536248 
End bp5536724 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content63% 
IMG OID644957966 
ProductHemerythrin HHE cation binding domain protein 
Protein accessionYP_003115568 
Protein GI256394004 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00231267 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGGCA TCGTCCTGCT CAAGGAAGAC CACAAGGTCG TCAAAGCCCT GTTCCGCGAG 
TTCGAGAAGA TCAAGGACAG CGCGACCCCG GCGGCCAAGA AGAAGGTCGT GGACAAGATC
TGCACCGAGA TGGTCACGCA CTCCTTCATC GAGGAGACGA TCTTCTACCC GGCCGCGCGC
GAGGGCGCCC CGGACACCAC CGACCACATC CTGGAATCCG TCGAGGAACA CCACGTCGTG
GCCTGGCTGC TGTCCGAGCT CAAGGACCTC GATCCGAAGG ATGAGACGTT CGACGCCAAG
ACCACGGTCC TGATCGAGAA CGTCCGCCAC CACATCGAGG AAGAGGAGAC CGAGTGGTTC
CCCCAGGTCC GCAAGGCTCT GGGTCGCAAC CGTCTGGTCG AGCTCGGTGA GCAGATGGCC
GCCGCCAAGA GCAAGGCGCC CGCAGACCCC TTGGCTTTGT CGTCCGCACA GAGCTGA
 
Protein sequence
MDGIVLLKED HKVVKALFRE FEKIKDSATP AAKKKVVDKI CTEMVTHSFI EETIFYPAAR 
EGAPDTTDHI LESVEEHHVV AWLLSELKDL DPKDETFDAK TTVLIENVRH HIEEEETEWF
PQVRKALGRN RLVELGEQMA AAKSKAPADP LALSSAQS