Gene Caci_4843 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4843 
Symbol 
ID8336197 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp5514124 
End bp5514531 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content72% 
IMG OID644957943 
Productprotein of unknown function DUF1469 
Protein accessionYP_003115545 
Protein GI256393981 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0258139 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATCG ACGACCGGCG CGAGACGCAC GCCGACGAGC ACCTGGCGAC GCTGCTGACG 
CAAGCCGCGC ACCAATTCGG ACAGCTGGCG CGCGACGAAC TCCAGACCGC CCGGGCCGAG
TTCGCCCGCA ACCGCCGCAC CCTGGGCTTC GGCGGCGGCC TGATCGGCGG CGCGGGCGTG
CTGGCGTTCG TCGCGGTACA GGCCGTCGCC GCCGCGGTGA TCGCCGCGCT CGCCCTGGCG
ATGCCGGTGT GGCTGGCGGC GCTGATCGTC GGCGTGGCCG CGGGACTGAC AGCGGCGGTC
CTGGCACTGG TCGGCAAGAA GCAGGTGGGA CGCGTCGTAC CCGTAGTGGA GGAGACCGTG
GACAGCGTGA AGGCCGACGT GGCCGTGATC AAGGAAGGCG GTCGGTAA
 
Protein sequence
MSIDDRRETH ADEHLATLLT QAAHQFGQLA RDELQTARAE FARNRRTLGF GGGLIGGAGV 
LAFVAVQAVA AAVIAALALA MPVWLAALIV GVAAGLTAAV LALVGKKQVG RVVPVVEETV
DSVKADVAVI KEGGR