| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4815 |
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| Symbol | |
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| ID | 8336169 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 5487434 |
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| End bp | 5490034 |
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| Gene Length | 2601 bp |
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| Protein Length | 866 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644957915 |
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| Product | transcriptional regulator, LuxR family |
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| Protein accession | YP_003115517 |
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| Protein GI | 256393953 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3899] Predicted ATPase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.636863 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGCGAGG TTTCTGCGGG CGTGCCACTG GTGGAGCGGG ACTCCCAGTT AGCTGAACTG
GTCCGGTACG TACAGGAGGC GGCACAGGGC GCCGGGCGTC TGATCCTGGT CTCGGGCGAG
GCCGGGGTGG GGAAATCGGC GCTGCTGGCG GCGGCACGGC GGGAGGTGAC CGCCGCGCGG
TGGTCGTGGA GCTCTTGCGA CGGGTTGTTC ATCCCGCAGC CGCTGGGTCC GTTGTTCGAC
GTGGCCGGGC AGCTTGGCGG CGCGCTGGCG GAGCGCTGCG CGGCCGGCGG CGAGCGCGAG
GACCTCTTCC GCGCGCTGGT GCGGGAGCTG GGATCGGCCG GGGTCCCCGA CGTGGTGGTG
GTCGAGGACG TGCACTGGGC CGACGAGGCC ACCCTGGACC TGCTGCGGTT CCTGGGCCGC
CGCCTGCGGG ACGCGGCGGC GGCGGTGATC GTCACCTACC GCGACGACGA GGCCGGCGGC
GACGCGCTCC GGGTCGCGCT GGGCGATCTG GCCGCGCAGC CCTCGACGCG CCGGATCGGC
CTCACGCCCC TGTCTGCGGA CGCGGTCCGG ATCCTCGCCG AGGGCAGCGG ATTCGCGCCG
GACGCCGTGT TCCGGCTGAC CGCGGGCAAC CCGTTCTATG TCACGGAACT GCTGCAGGCG
CAGACCCAAG GCGTGCCGGC GTCGGCGCGC GACGTGGCCC TGGCCCGGGC CGCCCGCCTG
GACGCCTCCG CCCGCGGCGC CCTGGAGACC GCGGCACTGC TCGGCGCCAA AGTCGAGCTG
CCGCTGCTGG CAGCGCTGAG CGACACCGCC GGGCTCGACG GGCTGCTGGC GTCCGGACTG
CTGGTCGCCG ACGGGATGTG GCTGTGCTTC CGCCATGAGA TCGCGCGGCT CGCCGTCGCC
GAGGCGGTGC CCGCGCATCG CTGTCTGCTA ACCCACCGGC GGGCGCTGGA GGCGCTGTCC
ACGCAGGGCT GCGACGACCA GGCCCGGCTG GCCTACCACG CCGAGGGGGC GGGCGATGCC
GTCGCGGTGC TGCGCCACGC CCCGGCGGCG GCCCGGCACG CCAGCCGGCT CGGTGCGCGG
CCCGAAGCGG CCGCTCAGTT CGCCCGCGCG CTCCGGTTCG CCGACCGCGC CGAACCTGCC
GAACGCGCGG ACCTGAACGA AAAGCTCGCC GACGAACTCG TGCTGCTCGA CCGCTGCCCG
GAAGCCGAGG CTGCCGCACG GCAAGCTCTG GCGCTACGGC GCGAGATCGG CGACCGGCTC
GGCGAGGGCG AGGCGCTGGC CCGGCTGTCG GGCATCACAT GGAGTCTGAG CCGCAGCCAG
GAAGCCGCCG CCTGGATGCG GGCCGCGCTC GTCGTCCTCG AACCGCTCGG GCCCACCGTC
GAGCTCGCCG GAGCCTATGC GGCGCTGGCA CAGCAGCGCC TTCTGTGCGC GGACTACGAG
AACACGATCG TCCTGGCCCG TCGGGCGCGG GACCTGGCCG CCCACTTCGA CGCCACCGCC
GAGCTGAGCC TGGCGTTGAG CACCGAGGCG GCCGCCAGCG CCAAGCTGGG ACGGGAGTGG
TCGGACCTGA TGCACCACGC CCTGAAGATC GCCCTGGCCG GCCGGCACCA CGACCAGACG
GCCCGCGCCT TCATCGCCCT GGGCAACATC AGCGAGAACC GGCTCCGGTT CGCCGACGCC
GAGCGTTTCC TGGCCGAGGG AATCGCGTAC TGCGACGAGC ACGACATGAC GTACCACAAC
ATCTCGCTGC ACAGCAGCCA GATGCACGTG TACGAACGCA CCGGCCGCTG GGAGGAGGCC
GTGGCCCTGG CCGAGCAGGT CCTCAGGGAG GCCGGCCCGT GGCCGATGGA CCGCCACTGC
GCCCTGGTCC GGCTCGGCAC GATCATGGCC CGGCGCGGCA CCGCGGGCTT CTGGCCGTAT
CTGGACGAGG CCGCCGCGAC CTCCGACGCC GAGGGCAAAC CGCCCTACCT GATCAAGTCC
CGCCTGGCAC GGGCCGAGGC CCACTGGCTC GCCGGCGATG CCGCCCAGGC CCGCAAGGCG
GCGGAATCAG CGATCGGCCC GGGTACGGTG TGCAGCGCCA CCGAACGCGG AGCGGTCGCG
GTCTGGCTGC GGCGCACCGG TTCGCAGCGC TCGGTCCCGG GCGTGATCGC CGAGCCCTAT
CAGCACATGC TCGACGGCGA TGCGGAGAAG GCGGCGGCGA TGTGGGCCGA GCTGGGCTGC
CCGTACGACG CCGGCCTGGC GCTGCTCGAC TCGGGAGAGG AGCGGCTGCT GCACCAGGCC
TACCGCATCT TCACCGACCT CGGCGCCACC GCCACCGCGC AGCTGCCGCG CCGCACGCTG
CGCAGCCTGG GCGTCCGCGC CGTCCCCACC GGCCCGCGCG CCGCCACCCG CGAGCATCCC
CTGGGCCTGA CCCGCCGCCA GCACGACGTC CTCGGCCTCA TCGCCGACGG GCACACCAAC
GCGCGGATCG CCGAGCAGCT GTTCATCTCG GCGAAGACCG TCGACCACCA TGTATCGGCG
ATCCTCGCCA AGCTCCAGGC GCCGGACCGG GCCGCTGCCG GGCGGATCGC GCGGTCGGGG
GTGCGGGCGA CGGCGATGTG A
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| Protein sequence | MGEVSAGVPL VERDSQLAEL VRYVQEAAQG AGRLILVSGE AGVGKSALLA AARREVTAAR
WSWSSCDGLF IPQPLGPLFD VAGQLGGALA ERCAAGGERE DLFRALVREL GSAGVPDVVV
VEDVHWADEA TLDLLRFLGR RLRDAAAAVI VTYRDDEAGG DALRVALGDL AAQPSTRRIG
LTPLSADAVR ILAEGSGFAP DAVFRLTAGN PFYVTELLQA QTQGVPASAR DVALARAARL
DASARGALET AALLGAKVEL PLLAALSDTA GLDGLLASGL LVADGMWLCF RHEIARLAVA
EAVPAHRCLL THRRALEALS TQGCDDQARL AYHAEGAGDA VAVLRHAPAA ARHASRLGAR
PEAAAQFARA LRFADRAEPA ERADLNEKLA DELVLLDRCP EAEAAARQAL ALRREIGDRL
GEGEALARLS GITWSLSRSQ EAAAWMRAAL VVLEPLGPTV ELAGAYAALA QQRLLCADYE
NTIVLARRAR DLAAHFDATA ELSLALSTEA AASAKLGREW SDLMHHALKI ALAGRHHDQT
ARAFIALGNI SENRLRFADA ERFLAEGIAY CDEHDMTYHN ISLHSSQMHV YERTGRWEEA
VALAEQVLRE AGPWPMDRHC ALVRLGTIMA RRGTAGFWPY LDEAAATSDA EGKPPYLIKS
RLARAEAHWL AGDAAQARKA AESAIGPGTV CSATERGAVA VWLRRTGSQR SVPGVIAEPY
QHMLDGDAEK AAAMWAELGC PYDAGLALLD SGEERLLHQA YRIFTDLGAT ATAQLPRRTL
RSLGVRAVPT GPRAATREHP LGLTRRQHDV LGLIADGHTN ARIAEQLFIS AKTVDHHVSA
ILAKLQAPDR AAAGRIARSG VRATAM
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