| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4811 |
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| Symbol | |
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| ID | 8336165 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 5481357 |
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| End bp | 5484353 |
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| Gene Length | 2997 bp |
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| Protein Length | 998 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644957911 |
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| Product | protein of unknown function DUF214 |
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| Protein accession | YP_003115513 |
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| Protein GI | 256393949 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.661642 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGTCA TGATCTGGAA GGTCGCCGTG CGTATCGCAC GTCGCGAGGC GGTGCGTCAC
AAGGGGCGGT CGGCACTGGT GGCGGCCATG TTGGCGTTGC CCGTGGCGGG GGCGAGTGCG
GCTGACACGC TGTACCACAC CACCAAGTTG ACCACGGTGG AGCAGGTGCG GCGGGACATC
GGGCGGTCCG ATGCGCTGGT GTCGTTTGTG GCGCCGGTGC CGATCGAGCA GATGCCGGAC
GGGTCCGTGC CGGTGCCTCC GCAGGCGGCC GGGATGCTCG CGGGGGCGTT GCAGGGCGCG
CAGATCGCTT CGCCGGTGGA CGATGGGGCG CTGCCGCCGG GGTCGCGGGT CATCCCGATG
CCGGCGCCGC AGGAGTTGCG GATCAGTTCG CCGCAGGGTG CTTATTCGGT GCAGGGCGCT
GAGCGGGATC TGGCCAGCCC GCTGCTCGAT GGGCTCTATG TGAAGAAGGC CGGGCGCGCG
CCAAGCGCCA AGGGCGAGGT GACGCTGTCC ACCTCGATGC TCTCCGAGCT GAACAAGCAC
GTCGGCGACC AGGTGAGTGC CGAGTTTCTC AGTGCCGGGG AGCAGCCCGG GTCTGACGGT
CGGCTGCCGG AGCATCAGCT GACCATCGTC GGCGAGTACG ACGACCCCAC GCACCTGGAC
GCCGACCGCC TCGTCGCCTA TCCCGGCACG CTGCCCAGCG CGCCGGGCGA TCCAGGTCCG
TCGCAGTGGC TCGCGCAGGT GCCCGGCGGG CTCGACTGGG CGCAGGTGCA GAAGCTGAAT
CAGAGCGGGT ACTCCGCCGA GTCGCTGCTG GTCGCCGAGA ACCCGCCGCC GGATTCCGCG
GTCCCGCTGA TGCGGCACTA CACCGCGGCG TCGGTGGGCA GCAGCCGGCT GACGCAGGCG
CTGGTCGCGG TGGGGGCGCT CGGCGTCGTC ATGGCGCTGC TGGAGGTCGT GCTGCTGGCC
GGGCCGGCGT TCGCGGTGGG GGCGCGCAAG CGGCGGCGGG ACTTCGGGCT GATGGGTGCC
GCCGGCGCCG ATCAGCGGAT GGTGCGGGCG GTGGTGCTGG CCGACGGGCT GGTGCTGGGT
GCCGTCGGCG GGGTCGTCGG GGCGCTGGCC GGGATCGGGT TGGGGCGGCT GGCGCTGCCG
GAGGCTGTGA GTCTCACACA CCGCGAGCCG GGGGCGTTCC GGATCGCGCC GGGCGATCTG
GCCGGGGCGG CGCTGATCGG CGTGGCGACC GGGCTGATCG CGGCGCTGAT CCCGGCCGTC
ATCACCGGGC GGCAGTCGGT GTTGCAGGCG CTGACGGGTG GCCGGCGCGG GGCGCGCGGC
GTGCCGTGGA AGCTCGCGGT GTTCGGCGTG CTGATCCTCG GCGCCGGGAT GGCCGCGACC
GGTTACGCCG TCTACCAGCC CGGGATCCAC ACCGTACCGC TGGTCGCGGG AATCGCCGTG
TGCGAACTCG GCGTGGTGGC GTGCACGCCG CTGCTGGTCG CGCTGACCGG CAAACTGGGG
CGGATGCTGC CGCTGACCGG GCGGATGGCG CTGCGCGACA GTGCCCGCAA CCGGGGTCGC
ACCGCGCCGG CCGTCGCGGC GATCCTGGCC GCCGTCGCCG GCTCGACCGC CGTGGCGACG
CTGCTGGCCA CCAACGACGC CCGCGACCGC GCGCAGTATC ACAGCACTCT GCGTCCCGGG
CAGGTGGCGC TGATGTTCGG CAGGCAGGCG GGCCAGACGG GCCAGACGGG GCAGGGAGGC
CTGAGCGACC AAGGCAGCCA GTTCGCGTTG TCCTCCAGCG ACCCGACCGA CCCGAACAGC
CCGAACGGAC CCGCCGGAGC CGCCGGAGCC GCCGGAGCCG CCGGAGCCGC CGGCAAGCCG
ATCGACACCG CCAAGGCGAT CGCCGCGATC AGCGCCACGC TGCCGGTCCG CTCCGCCGCG
GTGATCCCGA CGCAGGACTA CACCGGCTTC CTGCCGCTGA ACATCGTCGT CAAGCGCACC
GTGGCGAACG ACTGCCCCTT CTTCGGCAAC GGAGACGGCG CGATCACCTT CCCCTCGGGC
CAGGACAGCG AGTCGATGAT CCAGGCCGAT CCGCGCTGCG TGGCGGCGTT CAGCGGCGGG
CAGGTCGTGC CCGGGGACGC CGCGACGCTG CGCGCGCTCA CCGGAACCGT CGATCCGCAG
GCTGAGAAGG TGCTCGCCGC GGGCGGCATG GTGGTGTTCA GCCCGTACGA CCTCACCGGC
GACGGCGTCT CGACCATCGC CCTGCAGCGC AACTGCCCGC CGTCGGACGA CAGCGTGCCG
GACGTCGTCC GCGACCAGTT CGCGCCCTTC TGCAGCGGAC CGGCGCCGAA GCCGCTGACC
CTGCCGGCGG CGGTGGCCAA GACCAAGGAC GGCAGTGCGG TCAACGGTGT CAGAGCTCTG
ATTCCGGCGT CGGCGGCGGC CGGCTACGGC ATGAAGTACA TGCCGTCGAT GATCCTGTTC
GACACCACGC GCATGCCGAC CAAGGCCGAA GAAGAGCGCG CGAACGCCGC CGCCGAGGCT
CTGGGCACCA CCGCGCTGCT GAAGGTCGAG CGCGGCTACC AGGGCGGCAA CGACACCACC
ATGCTGGCGC TGGCCGCCGT CGCCGCGTTC GTCACGCTCG GCGCCGCGGC GATCTCCACC
GGTCTGGCCA TCACCGACGG CCAAGCCGAC CTGGAGACGC TGGCCGCGGT CGGCGCGCGC
CCGCGCGTGC GGCGCACCCT GGCCGGCTCG CAGGCCTCGA TCACCGCCGC GATGGGCGCG
GTGTTGGGCT CGGCGACCGG TCTGGTCCCG GCGGTGGCGG TGGTCGAGGC ACGGTCGCAC
AGCTTCGTGC AGTCGGCGCT GGAGGGCCGG GCGGACCGCG GCGTCCACGC CCAGAGTTAC
CTCGCAGTCC CCTGGTGGTT CCTGCTCGGC ACGATCGTGA TCGTTCCGAT GCTAGCCGGG
ATCGGTGCGG TGCTGGTGAC GCGCTCGAAG GTAGAGATTC GGCGACGACG GGGGTAG
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| Protein sequence | MDVMIWKVAV RIARREAVRH KGRSALVAAM LALPVAGASA ADTLYHTTKL TTVEQVRRDI
GRSDALVSFV APVPIEQMPD GSVPVPPQAA GMLAGALQGA QIASPVDDGA LPPGSRVIPM
PAPQELRISS PQGAYSVQGA ERDLASPLLD GLYVKKAGRA PSAKGEVTLS TSMLSELNKH
VGDQVSAEFL SAGEQPGSDG RLPEHQLTIV GEYDDPTHLD ADRLVAYPGT LPSAPGDPGP
SQWLAQVPGG LDWAQVQKLN QSGYSAESLL VAENPPPDSA VPLMRHYTAA SVGSSRLTQA
LVAVGALGVV MALLEVVLLA GPAFAVGARK RRRDFGLMGA AGADQRMVRA VVLADGLVLG
AVGGVVGALA GIGLGRLALP EAVSLTHREP GAFRIAPGDL AGAALIGVAT GLIAALIPAV
ITGRQSVLQA LTGGRRGARG VPWKLAVFGV LILGAGMAAT GYAVYQPGIH TVPLVAGIAV
CELGVVACTP LLVALTGKLG RMLPLTGRMA LRDSARNRGR TAPAVAAILA AVAGSTAVAT
LLATNDARDR AQYHSTLRPG QVALMFGRQA GQTGQTGQGG LSDQGSQFAL SSSDPTDPNS
PNGPAGAAGA AGAAGAAGKP IDTAKAIAAI SATLPVRSAA VIPTQDYTGF LPLNIVVKRT
VANDCPFFGN GDGAITFPSG QDSESMIQAD PRCVAAFSGG QVVPGDAATL RALTGTVDPQ
AEKVLAAGGM VVFSPYDLTG DGVSTIALQR NCPPSDDSVP DVVRDQFAPF CSGPAPKPLT
LPAAVAKTKD GSAVNGVRAL IPASAAAGYG MKYMPSMILF DTTRMPTKAE EERANAAAEA
LGTTALLKVE RGYQGGNDTT MLALAAVAAF VTLGAAAIST GLAITDGQAD LETLAAVGAR
PRVRRTLAGS QASITAAMGA VLGSATGLVP AVAVVEARSH SFVQSALEGR ADRGVHAQSY
LAVPWWFLLG TIVIVPMLAG IGAVLVTRSK VEIRRRRG
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