Gene Caci_4796 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4796 
Symbol 
ID8336150 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp5463015 
End bp5463857 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content69% 
IMG OID644957896 
Productsecreted hydrolase 
Protein accessionYP_003115498 
Protein GI256393934 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.31907 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTCCCTC GTCCCCACAA GCGGACGCGG ACGCGACGTC CCGCGATCAA GCGGGCGCTG 
CTCGTCCTGG CCGCGGTGAC GACCGCTTTC ACCACCGTGA TGGCGACCGA CGCCTCGGCC
GCGAGCAGCG TGCACTACGT CGCGCTCGGT GACTCCTACT CCTCCGGCGT CGGCTCCGGC
TCCTACATCT CCTCCTCCGG CAACTGCCTG CGCAGCACCC TGGCGTACTC CCAGCTGTGG
GCCAACGCGC ACAGCCCGGC GAGCTACACC TCGGTGGCCT GCTCCGGCGC CACCACCACC
GACGTGCTGA ACAGCCAGAT CTCGGCGCTG AGCTCGTCCA CCAACCTGGT GAGCATCACC
ATCGGCGGCA ACGACGTCGG CTTCTCCTCG GTGATGCAGA CCTGCGTCCT GGACTCCGAC
AGCACCTGCC TGAGCGCGAT CAACGCCTCG GTCGCGCAGG CCAAGTCGGT GCTCCCGGGC
AAGCTGGGGA CCACCTTCTC CGCGATCCGC AGCGCCGCGC CCAGCGCGCG GGTCGTCGTG
ATGGGCTACC CCGAGTTCTA CGACCTGGGC AACTCCTGGA TCTGCCCGGG CCTGTCCACC
ACGGACCGGA CCGCGCTGAA CAACGCCGCC GACACGCTGG ACGGCATCAT CCAGACCGCG
GCCAAGAACG CCGGCGACTC CTACGCCGAC GTGCGCAGCA AGTTCTCCGG GCACGAGCTG
TGCGACTTCT TCAACGAGTG GCTGCACTCG GTGAACATCA CCGACGTCAC CGAGTCCTAC
CACCCGACCG CCGACGGCCA GTCCGGCGGC TACCTGCCGG CGATGGACTC CATCACCGGC
TGA
 
Protein sequence
MLPRPHKRTR TRRPAIKRAL LVLAAVTTAF TTVMATDASA ASSVHYVALG DSYSSGVGSG 
SYISSSGNCL RSTLAYSQLW ANAHSPASYT SVACSGATTT DVLNSQISAL SSSTNLVSIT
IGGNDVGFSS VMQTCVLDSD STCLSAINAS VAQAKSVLPG KLGTTFSAIR SAAPSARVVV
MGYPEFYDLG NSWICPGLST TDRTALNNAA DTLDGIIQTA AKNAGDSYAD VRSKFSGHEL
CDFFNEWLHS VNITDVTESY HPTADGQSGG YLPAMDSITG