Gene Caci_4759 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4759 
Symbol 
ID8336113 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp5422127 
End bp5422900 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content75% 
IMG OID644957859 
Productmodification methylase, HemK family 
Protein accessionYP_003115461 
Protein GI256393897 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2890] Methylase of polypeptide chain release factors 
TIGRFAM ID[TIGR00536] HemK family putative methylases 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGAGG ACGTCGTGGC GAGGCTGCGC GCCGCCGGGT GTGTGTTCGC CGAGGACGAG 
GCGGAGCTGT TGGCGCAGGC CGTGAAGGAG GACGCCGAGC CGGCGCGGCG CCTGGAGGCG
TTGGTGGCCC GGCGCTGCGC CGGCGAGCCG CTGGAGCACG TCGTCGGGTG GGCCGAGTTC
TGCGGGCTGC GGATCGGGGT CGGGCCGGGC GTGTTCGTGC CCCGGCGGCG CTCGGAGTTC
CTGGTCGAGT TGGCGCTCGA CCTCGGGCGC GAGGCGCGCG TGGTGGTGGA CCTGTGCTGC
GGGTCGGCGC CGTTCGCCAC GGTGCTGGCG GCACGGCTTT CCGGCGCGGA GGTGCACGCC
GCGGACATCG ACCCCGCGCA GCTCGCCTAC GCGCGGGAGA ATCTCGGCCG CCGTGGCTCG
ACGCACGAAG GCGACCTGTA TGAGGCGCTG CCAGAGCGGC TGCGGGGGAA GGTGGATCTG
CTGGTGGTGA ACGCGCCTTA CGTGCCGACC GACGCGTTGT CGACGCTGCC CGCCGAGGCG
CGGGTCTTCG AGCCGGCGGC GAGTCTGGAC GGCGGCGCCG ACGGGCTCGC GGTGCACCGG
CGGGTCGCGG ACGGGGCGCC GCAGTGGCTG GCGCCGCGCG GGCATCTGCT GATCGAGACC
AGCGAGGCGC AGGCCGAGGC GATGCTGGAG GCGTTCGGGG AGGCCGGGCT CAAGGCGTGG
ATAGCGCAGG ACCAGGAGCT GGACGCGACG GTCGTCATCG GGCGGCAGGC GTGA
 
Protein sequence
MSEDVVARLR AAGCVFAEDE AELLAQAVKE DAEPARRLEA LVARRCAGEP LEHVVGWAEF 
CGLRIGVGPG VFVPRRRSEF LVELALDLGR EARVVVDLCC GSAPFATVLA ARLSGAEVHA
ADIDPAQLAY ARENLGRRGS THEGDLYEAL PERLRGKVDL LVVNAPYVPT DALSTLPAEA
RVFEPAASLD GGADGLAVHR RVADGAPQWL APRGHLLIET SEAQAEAMLE AFGEAGLKAW
IAQDQELDAT VVIGRQA