Gene Caci_4756 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4756 
Symbol 
ID8336110 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp5420071 
End bp5421033 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content71% 
IMG OID644957856 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_003115458 
Protein GI256393894 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATTC TGATGTTGGG CGGTACCGGG TTCGTGGGGC GGGCTGTGGT CGAGGATGCC 
CTCGCTCGTG GCCATGATGT GACCATCTTC AGCCGCGGGC GCTCCGGCGC TGGCTTGTTC
CCGCAGGTGG CGCGGCTGGT CGGTGATCGG GACGGCGATG ACTACGCCGC TTTGGCGACC
GGCGCTTGGG ACGCCGTCGT GGATTCCTCC GCCTATGTGC CGCGGCACGT CAACAACGCC
ATGGACGCCC TGGGCGACCG CGTCGGCCGC TACGTCTTCG TCTCCAGCCA TGCCGTGTAT
CCGCGCCGGG GGGTCGCGGC CGGCTCGACG GAGGACACTC CGCGCCGGGC GCCGGTGCGC
GATACCGAGG AACTCCTTGA GGAGACCTAT GGTCCGCTGA AGGTCGCGTG CGAGGACGAC
ATCCAGGCTC GGTTCGGCGA GCGTGCCAGC ATCGTGCGGC TGGGGAAGGT CGCCGGCCCG
CATGATCCGC AGAACGGCCT CACCTACTAC GTCCGCCGCG CCGCTGCCGG CGGCCGCCTT
GCCCTGCCGG GGCGCCCCGA GCAGCCGGTC CAGCTCATCG ACTCGCGCGA CGCCGCCCGC
CTGATGGTCC GCCTCATCGA GGACGACCGC GGCGGTGCCT TCAACGCCGT CGGGCCGGGC
ACGCCGATCA CCCTGGCCGA CACGATCCAC ATCTGCGCCC GCGTCGCCGG CACCGAGGTG
GAGATCGTGC CGGTGCCGGA GCAGGACGCG CAGGGCACCT TCTTCCCTCT GATCCGCGAC
CCGGCCGAAT GGAACGTCAT GCAGCGGGAC CCGGCGCGCG CCGTGGCGGC CGGGATGCCG
CAGACGCCGT TCGAGACGAC GGTCGCCGAC GTCCTGGCCT GGGACCGGGA GCGCGGAACG
CCGCCGCTGA AGTTCGGCTT CACGGCAGAG GAAGAGGCGA AGGCGCTGGC TGAGGCGAAA
TAG
 
Protein sequence
MRILMLGGTG FVGRAVVEDA LARGHDVTIF SRGRSGAGLF PQVARLVGDR DGDDYAALAT 
GAWDAVVDSS AYVPRHVNNA MDALGDRVGR YVFVSSHAVY PRRGVAAGST EDTPRRAPVR
DTEELLEETY GPLKVACEDD IQARFGERAS IVRLGKVAGP HDPQNGLTYY VRRAAAGGRL
ALPGRPEQPV QLIDSRDAAR LMVRLIEDDR GGAFNAVGPG TPITLADTIH ICARVAGTEV
EIVPVPEQDA QGTFFPLIRD PAEWNVMQRD PARAVAAGMP QTPFETTVAD VLAWDRERGT
PPLKFGFTAE EEAKALAEAK